Pairwise Alignments

Query, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

Subject, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

 Score =  169 bits (427), Expect = 1e-46
 Identities = 99/292 (33%), Positives = 168/292 (57%), Gaps = 5/292 (1%)

Query: 9   IEQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECS-LLQAQPSDLQDFLAERLEGG 67
           +E+F   L  E+ L+  T  +Y+  L ++  +L     +   Q   + ++  + +    G
Sbjct: 17  LERFYAYLHTEKGLSLYTQRNYKQQLETMTQYLVQVGLTHWTQLDSAWVRQLVMQGKRQG 76

Query: 68  YKATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQVDALLAAPV 127
            KA+S A  LS++R    +L    +   +P+  +S+P+  + LPK+L   ++  LL    
Sbjct: 77  MKASSIATRLSSLRSFLDFLILRGELQANPAKGVSAPRKQRTLPKNLDVDEMAQLLEV-T 135

Query: 128 TDQPIELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLVPLGEEAV 187
            D P+ +RD+A++EL+Y  GLR++ELV + I DV+L +G +RVIGKGNKER V    +A 
Sbjct: 136 DDDPLSIRDRAIMELMYGAGLRLAELVSIDIKDVNLSEGEIRVIGKGNKERKVWFAGQAQ 195

Query: 188 YWLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASIDSNKLSPHVL 247
            W+ ++L+       + +T   LF S    +++ ++   R+  +    ++ S+ +SPH L
Sbjct: 196 EWVGKWLKLRSQLADSAET--ALFVSKLGTRISHRSVQKRMAEWGQKQAVASH-ISPHKL 252

Query: 248 RHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPRA 299
           RH+FATH+L    +LR VQ LLGH +++TTQIYTH+  + L  ++ Q HPRA
Sbjct: 253 RHSFATHMLESSNNLRAVQELLGHENIATTQIYTHLDFQHLAQVYDQAHPRA 304