Pairwise Alignments

Query, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

Subject, 330 a.a., site-specific tyrosine recombinase XerC from Sinorhizobium meliloti 1021

 Score =  157 bits (397), Expect = 3e-43
 Identities = 108/299 (36%), Positives = 163/299 (54%), Gaps = 15/299 (5%)

Query: 11  QFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECS------LLQAQPSDLQDFLAERL 64
           ++L +L  ER L+E T+ +Y  D R    +L  H         +   +P+DL+ FLA+R 
Sbjct: 37  RWLASLAEERRLSEKTVDAYERDTRQFLTFLTGHLAGPPRLSDICALRPADLRGFLAQRR 96

Query: 65  EGGYKATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQVDALLA 124
           +GG  A +  R L+ +R   +YL R        +  + SPK P+ LPK LT+ +   ++ 
Sbjct: 97  KGGAGARTLGRGLAGLRSFLRYLERNGLANAAGAGAVRSPKQPKSLPKALTDREALKVVT 156

Query: 125 AP--VTDQP-IELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLVP 181
           A   + ++P I  R+ A+L LLY  GLR++E + LT +D S     +RV GKG K R+VP
Sbjct: 157 ADAQLAEEPWIAARNAAVLTLLYGCGLRIAEALDLTPADFSGPVTSLRVTGKGGKTRIVP 216

Query: 182 LGEEAVYWLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRI-KHYATLASIDSN 240
           +   A   +E Y +   P+ +  +  + +F   R  ++        + K  A L   DS 
Sbjct: 217 MIAAAAEAVETYRKLC-PYHIEPE--EPIFRGARGAKLQPAIIQREMQKLRAALGLPDS- 272

Query: 241 KLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPRA 299
             +PH LRH+FATHLL  G DLR +Q LLGH+ LSTTQ+YT V + RL  ++ + HPRA
Sbjct: 273 -ATPHALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVDSARLLEIYDRAHPRA 330