Pairwise Alignments

Query, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

Subject, 296 a.a., integrase/recombinase XerC (RefSeq) from Shewanella amazonensis SB2B

 Score =  169 bits (427), Expect = 9e-47
 Identities = 109/296 (36%), Positives = 165/296 (55%), Gaps = 8/296 (2%)

Query: 5   DQAL-IEQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECSLLQAQPSDLQDFLAER 63
           DQA  +E+F   L  ER L+  T+ +YR +L      L       L  Q  DL   +A  
Sbjct: 3   DQASWLERFTRYLATERQLSPMTVRNYRFELERADTLLGQRSWQQLSRQ--DLSGLMARL 60

Query: 64  LEGGYKATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQVDALL 123
              G    S +   SA+++  Q+L +E     +P+A LS+PK  + LPK+L    V+ LL
Sbjct: 61  HRQGLSPRSLSLTASALKQFGQFLLKEGLIDTNPAATLSAPKQSKTLPKNLDPDSVNHLL 120

Query: 124 AAPVTDQPIELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLVPLG 183
             P  D  + LRDKA++EL Y+ GLR++EL  L + D+      VRVIGKG+KER++P+G
Sbjct: 121 DIPPEDG-LALRDKAIMELFYSCGLRLAELAALDVKDLDRESREVRVIGKGSKERILPVG 179

Query: 184 EEAVYWLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASIDSNKLS 243
             A+  +  +L+            D LF S+R  +++ ++   R++ +A +  + S  + 
Sbjct: 180 SVALAAIGDWLKVRNQMPCQD---DALFVSSRGSRLSHRSIQARMEKWAQIQGL-SVGVH 235

Query: 244 PHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPRA 299
           PH LRH+FATH+L    DLR VQ LLGH++L+TTQIYT +  + L  ++   HPRA
Sbjct: 236 PHKLRHSFATHMLESSGDLRAVQELLGHANLATTQIYTSLDFQHLAKVYDGAHPRA 291