Pairwise Alignments

Query, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

Subject, 328 a.a., Phage integrase (NCBI) from Rhodospirillum rubrum S1H

 Score =  206 bits (523), Expect = 8e-58
 Identities = 131/298 (43%), Positives = 171/298 (57%), Gaps = 9/298 (3%)

Query: 10  EQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECSLLQAQPSDLQDFLAERLEGGYK 69
           E FL+ +  ER  A  T+ +Y  DLR  A +L       L      L+ +LA     G  
Sbjct: 23  EAFLEMMLAERGAARRTVEAYGRDLRDYAAFLREKGLDGLTVSRPTLRAYLATMAAAGLA 82

Query: 70  ATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQVDALLAAPVTD 129
             S AR LS +R+   +L  E +R DDP+  L SP+L + LP+ L+EA+VDALL A    
Sbjct: 83  PRSQARKLSCLRQFHGFLVSEGRRPDDPTIGLDSPRLGRPLPRVLSEAEVDALLVAAEAG 142

Query: 130 QPIE-LRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLVPLGEEAVY 188
           +    LR + +LELLY+TGLRVSELV L +S  +     + V GKG+KERLVPLG  A  
Sbjct: 143 EGARGLRARVLLELLYSTGLRVSELVSLPLSVANRDPETILVRGKGDKERLVPLGLPARA 202

Query: 189 WLEQYLEYSRPWLLNGQTLD------VLFPSNRAQ-QMTRQTFWHRIKHYATLASIDSNK 241
            L  +L  +RP  L             LFPS+ A+  +TR  F   +   A  A ID  +
Sbjct: 203 ALRDWL-IARPTTLPASGAARRRADRFLFPSSAAEGHLTRDGFAKMLGELALRAGIDPAR 261

Query: 242 LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPRA 299
           +SPHVLRH FA+H+L HGADLR VQ LLGH+D++TTQIYTHV  +RL  L +  HP A
Sbjct: 262 VSPHVLRHCFASHMLAHGADLRGVQTLLGHADIATTQIYTHVLDDRLTTLVRTAHPLA 319