Pairwise Alignments

Query, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

Subject, 300 a.a., site-specific tyrosine recombinase XerD from Marinobacter adhaerens HP15

 Score =  347 bits (891), Expect = e-100
 Identities = 178/300 (59%), Positives = 222/300 (74%), Gaps = 3/300 (1%)

Query: 1   MQKQDQALIEQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECS--LLQAQPSDLQD 58
           M+ +D+++I +F+DA+WLE  L E T  +YR+DL  L++WL        L   + +DL  
Sbjct: 1   MRAEDESVIVRFVDAIWLEDGLGEKTRQAYRSDLLRLSEWLESQPGKPLLRDVRRTDLLA 60

Query: 59  FLAERLEGGYKATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQ 118
           +++  L  G K++++AR LS +RR +++L RE   T+DP+  + SP+LP+RLP  LTE +
Sbjct: 61  WMSSGLAQGVKSSTAARRLSGLRRFYRFLLREGLITEDPTLRIDSPRLPRRLPDSLTEGE 120

Query: 119 VDALLAAPVTDQPIELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKER 178
           VDALL+ P     IELRDKAMLE+LY  GLRVSEL  L +  V+LRQGVVR+ GKG+KER
Sbjct: 121 VDALLSEPDPGIAIELRDKAMLEILYGCGLRVSELTELRVDQVNLRQGVVRITGKGDKER 180

Query: 179 LVPLGEEAVYWLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASID 238
           LVPLGEEAV WL QY++  RP LL G++ D LFP NRA  MTRQTFWHRIKHYA    I 
Sbjct: 181 LVPLGEEAVDWLLQYMKEGRPELLKGRSCDALFPGNRAAAMTRQTFWHRIKHYAVRVGIR 240

Query: 239 SNKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPR 298
            + LSPH LRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVA +RL+ LHQ HHPR
Sbjct: 241 KH-LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARQRLQSLHQAHHPR 299