Pairwise Alignments

Query, 326 a.a., tRNA-modifying protein YgfZ from Dickeya dianthicola ME23

Subject, 318 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  209 bits (532), Expect = 7e-59
 Identities = 131/313 (41%), Positives = 178/313 (56%), Gaps = 16/313 (5%)

Query: 17  PATLISLDDWALVTLAGPDTVKYLQGQLTADVDALQASQHVLCAHCDAKGKMWSNVRLFH 76
           P  L +L    L+ +AG     ++ GQ+TAD+ +L+ +Q    AHCD KGKM ++ R F 
Sbjct: 18  PLMLANLSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPKGKMLASFRTFT 77

Query: 77  YGDGLAYLERRSVRDTQLAELKKYAVFSKTTIA-ADDNVVLLGAAGLDIRAQLAPLFDAL 135
             D L  L  +   +  L +L+KYAVFSK T++ A +   LLG AG      +   F  +
Sbjct: 78  IKDALLLLMPKDTIEVDLPQLQKYAVFSKATLSNASEEWCLLGVAGEQANQFVTQHFGEV 137

Query: 136 PDADNAVVRQPGATLLYLPHPAERFLLVLEAQRAAALIETLQPRVQHN--DSRQWQALDI 193
             A    + + GA L      A+RF+LVL+ Q A+ALI       +H   D+  WQAL+I
Sbjct: 138 --AQELTLTEHGAIL----KDADRFILVLQPQAASALI------AEHTVFDASAWQALEI 185

Query: 194 AAGQPIIDSANSAQFIPQATNLQALQGISFTKGCYAGQEMVARAKYRGANKRALYWLAGT 253
           AAG P +  +++ Q++PQ  NLQA+ GISF KGCY GQE VAR KYRG NKRALY L GT
Sbjct: 186 AAGYPNLAPSHANQYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGT 245

Query: 254 GAQAPTAGDELEWKLGDNWRRTGTVLAASQLHDGTLWVQAVLNNDLEADNVLRVRDDSGS 313
            +        LE  L D +R+ G ++   Q  +  L + AVL ND E D  LR  +D  S
Sbjct: 246 TSLTINLETSLEIALEDGYRKGGQIIEFVQRGNQVL-LTAVLANDTENDAKLRFTEDEQS 304

Query: 314 QLAIQPLPYSLEE 326
            L +QPLPYSL+E
Sbjct: 305 SLTVQPLPYSLDE 317