Pairwise Alignments

Query, 957 a.a., aminomethyl-transferring glycine dehydrogenase from Dickeya dianthicola ME23

Subject, 962 a.a., glycine cleavage system P protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1362 bits (3524), Expect = 0.0
 Identities = 662/960 (68%), Positives = 801/960 (83%), Gaps = 6/960 (0%)

Query: 3   QTLSQLEHGSAFTERHIGPSAAQQQQMLAAIGADSLDGLTRHIVPADIQLPHPPAVGDAA 62
           QTL+QLE    F  RHIGP ++QQQ+ML  +GA+SLD LT  IVP  I+L    ++GD+ 
Sbjct: 4   QTLTQLEQHDLFLRRHIGPDSSQQQEMLNYVGAESLDDLTAQIVPESIRLSQELSIGDSC 63

Query: 63  TEHQALAELKAIAGRNLRYKSYIGMGYHAVLTPPVILRNVLENPGWYTAYTPYQPEVSQG 122
            E + +A ++ +A +N  +KSYIGMGY+    P VILRNVLENPGWYTAYTPYQPE++QG
Sbjct: 64  GEAEGIAYIRGLAKQNQVFKSYIGMGYYGTQVPNVILRNVLENPGWYTAYTPYQPEIAQG 123

Query: 123 RLEALLNFQQMTQDLTGLELASASLLDEATAAAEAMAMAKRVSKLKQANRFFVADDVHPQ 182
           RLEA+LNFQQ++ DLTGL+LASASLLDEATAAAEAMA+AKRVSK K+AN FFVADDV PQ
Sbjct: 124 RLEAILNFQQVSMDLTGLDLASASLLDEATAAAEAMALAKRVSKAKKANIFFVADDVFPQ 183

Query: 183 TLDVVRTRALTFGFDIVTGSAADAVKYDDVFGVLLQQTGTTGELHDYRALMSELKNRKVI 242
           TLDVV+TRA  FGF++V G A++AV ++ +FG L Q +   G++ D+  L +EL+ + VI
Sbjct: 184 TLDVVKTRAECFGFEVVVGPASEAVNHE-LFGALFQYSNRFGQITDFTDLFAELRAKNVI 242

Query: 243 ISVVSDIMALVLLAAPGKQGADIVLGSAQRFGVPMGYGGPHAAFFACRDEYKRAMPGRII 302
           ++V +DIM+LVLL +PG  GAD+V GSAQRFGVPMG+GGPHAAFF  RDE+KR+MPGRII
Sbjct: 243 VTVAADIMSLVLLKSPGSMGADVVFGSAQRFGVPMGFGGPHAAFFVARDEHKRSMPGRII 302

Query: 303 GVSRDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANMAGMYAVYHGPQGLKRIAG 362
           GVS+D  GN ALRMAMQTREQHIRREKANSNICT+Q+LLANMA  YAV+HGPQGLK IA 
Sbjct: 303 GVSKDTRGNRALRMAMQTREQHIRREKANSNICTAQILLANMASFYAVFHGPQGLKTIAS 362

Query: 363 RIHRLTDILAAGLTARGLTLRHQHWFDTLTVEVADKAAVLGRALSAGINLRADLDGAVGI 422
           RI+R  DILAAGL A+G++L +  WFDT++++  D AAV  RAL+A +NLR D DG VG+
Sbjct: 363 RINRFADILAAGLQAKGVSLVNNTWFDTISIKGLDVAAVNARALAAEMNLRFDADGIVGV 422

Query: 423 ALDETTRRDDVLALFAVLLGDEHGLDIDTLDAAVSRQ-SASIPSALLRSDDILTHPVFNQ 481
           +LDETT R D+ ALF V+LG  HGLD+  LDA +  Q S SIP++L+R D IL+HP FN+
Sbjct: 423 SLDETTIRTDIDALFEVILGAGHGLDVAALDAQIVAQGSQSIPASLVREDAILSHPTFNR 482

Query: 482 YHSETEMMRYLHRLESKDLALNQAMIPLGSCTMKLNAVAEMLPITWPEFAELHPFCPTEQ 541
           Y SETEMMRY+ RLESKDLALN +MI LGSCTMKLNA  EM+P++WPEFA +HPFCP +Q
Sbjct: 483 YQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMIPVSWPEFANMHPFCPLDQ 542

Query: 542 ALGYRQLITQLSEWLVQLTGYDAVCMQPNSGAQGEYAGLLAIRRYHESRNESERTLCLIP 601
           A GY QLI +LS WLV +TGYDAVC+QPNSGAQGEYAGLLAIR+YHESR E+ R +CLIP
Sbjct: 543 AKGYTQLIEELSSWLVNVTGYDAVCIQPNSGAQGEYAGLLAIRKYHESRGEAHRNICLIP 602

Query: 602 SSAHGTNPASAQMAGMQVVVVACDKQGNIDLNDLREKAQQAGDNLSCIMVTYPSTHGVYE 661
            SAHGTNPASAQ+AGMQVVV ACDKQGN+DL DL+ KA +  +NLSCIM+TYPSTHGVYE
Sbjct: 603 QSAHGTNPASAQLAGMQVVVTACDKQGNVDLEDLKAKAAEVAENLSCIMITYPSTHGVYE 662

Query: 662 ETIREVCQIVHQYGGQVYLDGANMNAQVGITSPGYIGADVSHLNLHKTFCIPHGGGGPGM 721
           ET+RE+C IVHQ+GGQVYLDGANMNAQVG+TSPG+IGADVSHLNLHKTF IPHGGGGPGM
Sbjct: 663 ETVREICNIVHQHGGQVYLDGANMNAQVGLTSPGFIGADVSHLNLHKTFAIPHGGGGPGM 722

Query: 722 GPIGVKAHLAPFVPGHQVVEMDGVLTRQGAVSAAPFGSASILPISWMYIRMMGAQGLKQA 781
           GPIGVKAHLAPFV GH VV+        GAVSAAP+GSA ILPISWMYI+++G++GLK++
Sbjct: 723 GPIGVKAHLAPFVAGHVVVKPGRESDNNGAVSAAPYGSAGILPISWMYIKLLGSKGLKKS 782

Query: 782 SQLAILNANYVAMRLKDAYPVLYTGRDDRVAHECILDIRPLKESSGISEMDVAKRLIDYG 841
           +Q A+LNANYV  +L + YPVL+ GR+DRVAHECI+D+RP+KE+SG++EMD+AKRL DYG
Sbjct: 783 TQTALLNANYVMKKLSEHYPVLFRGRNDRVAHECIIDLRPIKEASGVTEMDIAKRLNDYG 842

Query: 842 FHAPTMSFPVAGTLMIEPTESESKVELDRFIDAMLAIRGEIDRVAAGEWPHEDNPLVNAP 901
           FHAPTMSFPVAGTLMIEPTESESKVELDRFIDAM++IR EI +V AGEWP ++NPL NAP
Sbjct: 843 FHAPTMSFPVAGTLMIEPTESESKVELDRFIDAMVSIRAEIAKVEAGEWPADNNPLHNAP 902

Query: 902 HTQTEL--AADWSHPYSRELAVFP--AGQTHKYWPVVKRLDDVYGDRNLFCSCVPVSEYQ 957
           HT  ++  +A  S PYSRE+AVFP  A +T+K+WP V R+DDVYGDRNLFC+CVP+S+Y+
Sbjct: 903 HTMADIMDSAFDSRPYSREVAVFPSAAVRTNKFWPTVNRIDDVYGDRNLFCACVPLSDYE 962