Pairwise Alignments

Query, 342 a.a., 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC from Dickeya dianthicola ME23

Subject, 377 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 85/318 (26%), Positives = 127/318 (39%), Gaps = 40/318 (12%)

Query: 38  DAAAVTVHTTQYHHWQQLQPVLGDNVHFSLLAQAETVAGCDTLIYY-WPKSKQEAQFQLF 96
           DA    + T Q HH  QL     DN+ +      +T+     L+    PK+      QL 
Sbjct: 77  DARTSFLGTEQNHHRNQLPM---DNLQW--FTSRDTLPKDVALVLMKLPKNLTYFAHQLM 131

Query: 97  NLLSLLPVGCDIFVVGENRS-------------GVRSAEGILEPIAAINKIDSARRCGLY 143
            L  +LP GC + V  + +S             G  +A    +    I  I   +   L 
Sbjct: 132 RLSQILPAGCRVLVGAKAKSINSSLLALFAKHLGPANASLAWKKTRVITCISDGKPRALP 191

Query: 144 HGRLETLPTFALEDWWLEYDVDGVPVHTLPGVFSREGLDTGSQLLLSTLEPHRKGKVLDL 203
           +G    +P F L             +  L  VF+   LD G++++L  L   +   V+DL
Sbjct: 192 NGITWNIPEFNLT------------ISNLSNVFAANKLDIGARIMLDNLPQGKFNTVVDL 239

Query: 204 ASGAGVLAAAFARLSPKIRLTLSDVGAAALEASRATLAANGL-EGQV------IASNAYS 256
             G GVL    A+L P   +   D    A+ +++A    N L EG+         ++   
Sbjct: 240 GCGNGVLGLRAAQLYPNADIHFIDDSEMAVASAKANWTMNQLAEGKGHFHWDDCMTHLPE 299

Query: 257 DIQGRFDLIISNPPFHDGMQTSLHAAEVMIRGAASHLNQDGELRIVANAFLPYPALLDDT 316
           DI+   DL++ NPPFH G   + H A  M   A   L   G L IV N  L Y   L   
Sbjct: 300 DIEP--DLVLCNPPFHQGEAITDHIAWQMFLDARRRLKNGGILHIVGNRHLAYHVKLQRL 357

Query: 317 FGSHEVIAQTGRFRVYRA 334
           F +   +A  G+F + +A
Sbjct: 358 FKNCTTVASNGKFVILQA 375