Pairwise Alignments

Query, 544 a.a., SAM-dependent DNA methyltransferase from Dickeya dianthicola ME23

Subject, 472 a.a., Type I restriction enzyme StySJI M protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 69.3 bits (168), Expect = 3e-16
 Identities = 71/334 (21%), Positives = 138/334 (41%), Gaps = 56/334 (16%)

Query: 109 DFAKTFDDTLMDIAETNNEVFAVKTDGGAKVVLFDRLSEFIADSSKRNDFCRAIINKLME 168
           D  K +++TL  ++E +N +  + T    K+               +  + + +I  + E
Sbjct: 74  DLVKQYEETLKLLSELDNLIGTIYTKAQNKI--------------DKPVYLKKVITMIDE 119

Query: 169 FSFERIFTQKFDFYATIFEYLIKDYNSNAGGKYAEYYTPHAVARIMAAILVPEAQRGTVR 228
              E+      D    I+E +++    +      +Y+TP  + + M   + P+       
Sbjct: 120 ---EQWLIMDGDVKGAIYESILEKNGQDKKSGAGQYFTPRPLIQAMVDCINPQMGE---- 172

Query: 229 NVTCYDPSAGSGTLLMNVAHAIGEDRCSIFTQDISQKSS-----------SLLRLNLILN 277
             T  DP+ G+G  L+     +     S   +D  +  +           +L  +NL L+
Sbjct: 173 --TVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLH 230

Query: 278 NLVHSIPYVIQGNTILHPYHKDGQDLKRFDYIVSNPPFKMDFSDFRNALDTKENQPRFFA 337
            +      ++  +++     K+   L   D I++NPPF       R A     N+P F+ 
Sbjct: 231 GIGTDRSPIVCEDSL----EKEPSTL--VDVILANPPFGT-----RPAGSVDINRPDFYV 279

Query: 338 GIPNIPKSAKDKMAIYQLFLQHIIYSLKPGGKAAVVVPTGFITAQSGIDKAIREHLVKNR 397
              N   +          FLQH++  LK GG+AAVV+P   +  ++G  + IR+ L+++ 
Sbjct: 280 ETKNNQLN----------FLQHMMLMLKTGGRAAVVLPDN-VLFEAGAGETIRKRLLQDF 328

Query: 398 MLAGVVSMPSNIFATTGTNVSILFIDAGNKEKVV 431
            L  ++ +P+ IF   G   ++LF   G   K +
Sbjct: 329 NLHTILRLPTGIFYAQGVKANVLFFSKGQPTKEI 362