Pairwise Alignments

Query, 544 a.a., SAM-dependent DNA methyltransferase from Dickeya dianthicola ME23

Subject, 874 a.a., type I restriction-modification system, M subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  137 bits (346), Expect = 1e-36
 Identities = 130/492 (26%), Positives = 225/492 (45%), Gaps = 58/492 (11%)

Query: 29  DGNEFKIITQAFL-YKFLNDKFAYEAKKVDKTVANAERWEEALSQMSEAQLDKLQLRMNA 87
           + NE+K     F+ YK+L+D+      K   T  + +   E  +   +   D L   +  
Sbjct: 22  EANEYKDYILGFIFYKYLSDQLVQFVTKEGMTPEDIKALNEEDADTVKYIQDNLGYFIAY 81

Query: 88  DTARLKPRHFITHL-----FNQQNKSDFAKTFDDTLMDIAETNNEVFAVKTDGGAKVVLF 142
           D        F T +     F++ N  D    F      I+ T  ++F      G    L 
Sbjct: 82  DNL------FATWVDPAFDFDESNVRDALSAFSRL---ISPTYKKLFE-----GIFTTLE 127

Query: 143 DRLSEFIADSSKRNDFCRAIINKLMEFSFERIFTQKFDFYATIFEYLIKDYNSNAGGKYA 202
             LS+    + KR      +++ +          Q +D    I+EYLI+ + +NAG K  
Sbjct: 128 TGLSKLGESAGKRTKAISDLLHLIKSIPMNG--KQGYDVLGYIYEYLIEKFAANAGKKAG 185

Query: 203 EYYTPHAVARIMAAILVPEAQRGTVRNVTCYDPSAGSGTLLMNVAHAI-----GEDRCSI 257
           E+YTPH V+ +M+ I+  E +      +  YDP++GSG+LL+N+  A+      +D  + 
Sbjct: 186 EFYTPHEVSVLMSHIIAHELKHKD--TIEIYDPTSGSGSLLINIGEAVEKYAKSKDSITY 243

Query: 258 FTQDISQKSSSLLRLNLILNNLVHSIPYVIQGNTILH--PYHKDGQDLKRF-----DYIV 310
           + Q++   + +L R+NLI+  +  S      G+T+    PY  +      +     D +V
Sbjct: 244 YAQELKANTYNLTRMNLIMRGIKASNIKTRNGDTLEDDWPYFDENDPQGTYHALYVDAVV 303

Query: 311 SNPPFKMDFSDFRNALDTKENQPRFFAGIPNIPKSAKDKMAIYQLFLQHIIYSLKPGGKA 370
           SNPP+   +         K++ PR ++     PK+  D       FL H +Y LKP G  
Sbjct: 304 SNPPYSQAWDP-----SFKDSDPR-YSRFGLAPKTKAD-----FAFLLHDLYHLKPDGIM 352

Query: 371 AVVVPTGFITAQSGIDKAIREHLVKNRMLAGVVSMPSNIFATTG--TNVSILFIDAGNKE 428
            +V+P G +  + G +  IR+ L++   +  ++ +P+NIF  TG  T + +L    G+ +
Sbjct: 353 TIVLPHG-VLFRGGEEGEIRKQLIEQNHIDAIIGLPANIFFGTGIPTVILVLKQKRGSID 411

Query: 429 K----VVLIDASGLGEKVKDGKNQKTVLTPEEEQRICEVFTNQWNEEDFSVVVSYDEIAA 484
           K    V+++DAS     VK+GKN K  L   + +RI +   N+ + E FS VVS   +  
Sbjct: 412 KPQNDVLIVDAS--KHFVKEGKNNK--LQASDIKRIVDAVINRDSIEKFSQVVSKQTLRD 467

Query: 485 KNYSFSAGQYFE 496
             Y+ +  +Y +
Sbjct: 468 NGYNLNIPRYVD 479