Pairwise Alignments

Query, 628 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Dickeya dianthicola ME23

Subject, 799 a.a., DEAD/DEAH box helicase (NCBI) from Rhodospirillum rubrum S1H

 Score =  305 bits (780), Expect = 7e-87
 Identities = 199/531 (37%), Positives = 292/531 (54%), Gaps = 44/531 (8%)

Query: 7   SFASLGLSAPILSALSELGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLN 66
           +FA LGLS   L A+ E+GY  P+PIQ + IP++  GRDVLG+AQTG+GKTA+F+LP+++
Sbjct: 2   TFADLGLSPETLRAIEEVGYTTPTPIQVQAIPYVQMGRDVLGIAQTGTGKTASFTLPMID 61

Query: 67  NI---KAELKAPQLLVLAPTRELAVQVAEACNEFSKHMQGVNVVALYGGQRYDVQLRALR 123
            +   KA+ + P+ L+LAPTRELA QV+E    + K+ Q +++  L GG+  + Q + L 
Sbjct: 62  ILASGKAKARMPRSLILAPTRELATQVSENFTLYGKY-QKLSMALLIGGESMNEQQKVLD 120

Query: 124 QGPQIVVGTPGRLLDHLKRGTLDLSNLSGLVLDEADEMLRMGFIEDVENIMAQIPAEHQT 183
           +G  +++ TPGRL+D  +RG++ L ++  LV+DEAD ML MGFI DVE I+A +P   QT
Sbjct: 121 RGVDVLIATPGRLIDLFERGSILLRDVKVLVIDEADRMLDMGFIPDVERIVALLPKIRQT 180

Query: 184 ALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWTVYGMRKNEALIRFLEAE 243
             FSATM + IRR+   F+ +P+EVRI+ +      + Q+   V    K EAL + L  E
Sbjct: 181 LFFSATMDKEIRRLADAFLMNPKEVRIEPTQKVAETVEQALIMVKASEKREALRQLLRRE 240

Query: 244 DFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATD 303
               A IF   K     + ++L   G++  AL+GDM Q +R + LE+ K   + +++ +D
Sbjct: 241 TVTNAFIFCNRKRDVDVLYKSLSGHGFDILALHGDMPQYVRTERLEKFKRAEVQLMVCSD 300

Query: 304 VAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERT 363
           VAARG+DV  +S V N+D+P   E Y+HRIGRTGRAGR GRA       + + LR IE  
Sbjct: 301 VAARGIDVTEVSHVFNFDVPTHPEDYIHRIGRTGRAGRLGRAYTLATPEDAKYLRAIENL 360

Query: 364 MKLTIP-------------EVDLPNAE-----LLGQRRLAQFAAKVQQQLESSDLDMYRA 405
           +  TIP             +V L  AE       G +   +  A+ +    S+D +  R 
Sbjct: 361 LGKTIPPDPQLELSDVAVEDVALAVAEDDRRPKRGGKGRPERGAR-RSGRGSADAERPRP 419

Query: 406 LLGKLRPQEELDIETLAA--ALLKMAQGERPLVLPPESAAERRPRREFRER-DER----- 457
           L  +    ++  +E  A    L +    ERP V      AER   R   +R +ER     
Sbjct: 420 LAPERAANDQAPVERPAVEKTLAEQPVAERPPV--ERGQAERTAERPSSDRTNERASSDR 477

Query: 458 ------FERRGDRNERAPRSSDERPARRERR-----DVGEMDLYRIEVGRD 497
                  ER GD   R  R  D+R A R RR     D  + ++  + +G D
Sbjct: 478 SSERASSERNGDDRGRGGRGRDDRSAARGRRPRRWEDDPQSEVMEMRIGDD 528