Pairwise Alignments

Query, 294 a.a., lipoprotein NlpI from Dickeya dianthicola ME23

Subject, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 49.7 bits (117), Expect = 9e-11
 Identities = 31/90 (34%), Positives = 45/90 (50%)

Query: 62  AQLLYERGVLYDSLGLRALARNDFSQALSIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDS 121
           A++   +G     LG+   +   F +AL I P+  E FN LG  L++ GN+  A E +D 
Sbjct: 59  AEIWVNKGNSLLKLGIYGESTECFDKALLIDPENSEAFNGLGTVLSKTGNYQKALEMYDK 118

Query: 122 VLELDPTYNYARLNRGIALYYGGRYLLAQD 151
            L +D   + A  N+GI L    RY  A D
Sbjct: 119 SLNIDSENSEAWKNKGITLNNMQRYSEAID 148



 Score = 32.7 bits (73), Expect = 1e-05
 Identities = 24/109 (22%), Positives = 49/109 (44%)

Query: 38  LQQEVILARMEQILASRAITPDERAQLLYERGVLYDSLGLRALARNDFSQALSIRPDMPE 97
           +Q+ V+   +  +L       D++++   ++G+   + G    + ++++ AL   P   E
Sbjct: 1   MQKIVVFLTVILVLLMAGCIGDQKSKSYNDKGLELYNQGNYVDSISEYNLALLENPKSAE 60

Query: 98  VFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYARLNRGIALYYGGRY 146
           ++   G  L + G +  + E FD  L +DP  + A    G  L   G Y
Sbjct: 61  IWVNKGNSLLKLGIYGESTECFDKALLIDPENSEAFNGLGTVLSKTGNY 109



 Score = 32.7 bits (73), Expect = 1e-05
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 85  FSQALSIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDP 127
           + +AL I P   ++    GI L +  N+ AA   FD  ++LDP
Sbjct: 252 YDEALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQLDP 294



 Score = 28.5 bits (62), Expect = 2e-04
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 53  SRAITPDERAQL-LYERGVLYDSLGLRALARNDFSQALSIRPDMPEVFNYLGIYLTQAGN 111
           ++A+  DE+ +  L  +G  Y  L     A   F+ A +I P       Y         N
Sbjct: 185 NKALLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPPYYKADAYRDTEN 244

Query: 112 FDAAYEAFDSVLELDPTYNYARLNRGIAL 140
           F+ A + +D  LE++P+ +   +++GI L
Sbjct: 245 FEYALKYYDEALEINPSNSDILISKGICL 273



 Score = 25.8 bits (55), Expect = 0.001
 Identities = 17/87 (19%), Positives = 34/87 (39%)

Query: 60  ERAQLLYERGVLYDSLGLRALARNDFSQALSIRPDMPEVFNYLGIYLTQAGNFDAAYEAF 119
           E ++     G +    G    A   + ++L+I  +  E +   GI L     +  A + F
Sbjct: 91  ENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCF 150

Query: 120 DSVLELDPTYNYARLNRGIALYYGGRY 146
           D  + ++   +    N+G   +  G Y
Sbjct: 151 DKSISINAKNSDVWYNKGETQFKLGEY 177



 Score = 24.3 bits (51), Expect = 0.004
 Identities = 15/72 (20%), Positives = 32/72 (44%)

Query: 60  ERAQLLYERGVLYDSLGLRALARNDFSQALSIRPDMPEVFNYLGIYLTQAGNFDAAYEAF 119
           + + + Y +G     LG    + + +++AL I   M       G    +  N+++A E F
Sbjct: 159 KNSDVWYNKGETQFKLGEYEKSIDSYNKALLIDEKMETALLGKGNSYLKLQNYESAIECF 218

Query: 120 DSVLELDPTYNY 131
           ++   ++P   Y
Sbjct: 219 NTAETINPKSEY 230