Pairwise Alignments

Query, 313 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

Subject, 316 a.a., Periplasmic binding protein from Pseudomonas syringae pv. syringae B728a

 Score =  285 bits (728), Expect = 1e-81
 Identities = 141/294 (47%), Positives = 204/294 (69%), Gaps = 2/294 (0%)

Query: 15  SGFPVTVQSCGKPLTFTQAPQRAIINDLNMSEMAFALHLQPQIVGLTGISGWYTMTPEFR 74
           + +PVTVQSC + +TFT APQRA+ ND+N+++M  AL LQ  +VG +GI+GW        
Sbjct: 21  AAYPVTVQSCDRSVTFTAAPQRAVSNDVNLTKMMVALGLQSHMVGYSGITGWNKPDQALL 80

Query: 75  RQMGAIPELSPKYPSLETLLSASPDLFFAGWNYGMKVGGEVTPETLAKYGVKTLVLSESC 134
           R +G +PELS KYPSLETLL+A+ D +FAGWNYGM+VGG+VTP++LA  G++   L+ESC
Sbjct: 81  RDLGKLPELSSKYPSLETLLNANADFYFAGWNYGMRVGGDVTPQSLAPLGIQAYELTESC 140

Query: 135 MFEDRHRPRAGMDLLYGDELTLGKIFGREEQAQALVSQWKARLAALPKPPSGQAPLKVFV 194
             +   R  A ++ +Y D L LG+IF  + +A+ LV+Q +  ++ +    +G++P KVF+
Sbjct: 141 A-QIMPRAEATLEDVYNDLLNLGRIFDVQTRAETLVAQMRRSVSDVENSVAGKSPPKVFL 199

Query: 195 YDSGEDKPFTSGVYAMPTAIIDAAGGRNVMDGMAASWATTSWETVSAAEPDLIILLDYQN 254
           YDSGED+P T+G  A+P A+I AAGGRNVM  +AASW   +WE+V  + P++I+++DY  
Sbjct: 200 YDSGEDRPMTAGRLAIPQALISAAGGRNVMGDVAASWTHVNWESVVQSNPEVIVIVDY-G 258

Query: 255 GGGAAALQHFLESHPLMKHTPAVEHQRYLKLQYAELTPGPANIAAIEKLARALY 308
              AA  QHFLES+P +    A+ ++RY+ L Y  +TPG  N+ AIE LA A +
Sbjct: 259 EVSAAQKQHFLESNPALHSVDAIRNRRYVVLPYVAVTPGIDNVTAIETLAAAFH 312