Pairwise Alignments

Query, 279 a.a., ABC transporter permease from Dickeya dianthicola ME23

Subject, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

 Score =  171 bits (434), Expect = 1e-47
 Identities = 92/258 (35%), Positives = 144/258 (55%)

Query: 17  ATLLPATAVLLLLLAVFFPALFTHLLPDEMDMEAVLQPPGANHWFGTDTLGRDVFTRVVY 76
           A ++    ++L+ LAV F  +F+    ++ D  A+   P A HWFGTD LGRD+F R + 
Sbjct: 38  AAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDALGRDLFVRTLV 97

Query: 77  GTSLSLSIGVGAMLIACLGGVLLGTLSALAPLPVRRVLVRLLDIMLAFPEMLLALLVIAV 136
           G  +SL +G+   L+A L G L G  S        RV++R+L+I+ A P M L ++++  
Sbjct: 98  GGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIPFMFLVIVLVTF 157

Query: 137 LGRGPENTLLAVGLAGVAGYARLVRSQVLQVKLSGYVEHAVALGEHPLYIVVRHIIPNTL 196
            GR      +A+G       AR+VR Q L ++   ++E A   G     I+ RHI+PN L
Sbjct: 158 FGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWNIITRHIVPNVL 217

Query: 197 RPLLILATIGVGNAVLSASALSFLGLGVVPPTAEWGALLADGRNFLDIAPWVSLFPASVV 256
             + + +T+ + + +L+ S LSFLGLGV  P   WGALL +G N +++A W  LFPA+ +
Sbjct: 218 GIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVAIWQLLFPAAFM 277

Query: 257 ALSVIVITLLGRRLQAML 274
            L++     +G  L+  L
Sbjct: 278 VLTLFCFNYVGDGLRDAL 295