Pairwise Alignments

Query, 566 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  408 bits (1048), Expect = e-118
 Identities = 230/559 (41%), Positives = 338/559 (60%), Gaps = 22/559 (3%)

Query: 9   LLRVEGLNVTFPSPHGPVESVRNLSFQVNPGEILALVGESGSGKSVTARTLVGLAGERAQ 68
           LL V+ L + +PS HG   +V++L+  +  GEI+ +VGESG+GKS     ++ L      
Sbjct: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62

Query: 69  IQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQEVAEPLL 128
           I    + L   +G +  +  LS +  ++VRG +IGF+ QD + SL+PL  +  ++ E + 
Sbjct: 63  IAGGEVYL---NGEK--ISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIH 117

Query: 129 THKLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALAAGPKLLIA 188
            +   S  +   R   L+ QVGIP P NR  QYPH+ SGG+RQR +IA ALA  P L+IA
Sbjct: 118 ANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIA 177

Query: 189 DEPTTALDATVQQQVLKLFTALAQAGH-GVLLITHDLAVVSQVADQVMVMQNGALVERGA 247
           DEPTTALD ++Q Q+L L   L +  + G +L+THD+ VVS V D+V VM  G LVE G 
Sbjct: 178 DEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGP 237

Query: 248 ARQVLSAPQHPYTRRLLAAIPTAATRGNWL--------AGENPLSQQASTLLSSAGEPGE 299
             +VL  P+HPYTR L++A+P +  + +          A E       S  L  + +  +
Sbjct: 238 TAKVLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRK 297

Query: 300 KSGLALQVDGVSVSFKRPDG------SRMTAVNNISLTVERGETLGIVGESGSGKTTLGK 353
            +G  L+V+ V++ F   D         + A NN+S  V  GET G+VGESGSGK+T+ +
Sbjct: 298 YTGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIAR 357

Query: 354 VILALQPPDSGDILLSGKPWSAL-SERERRPLRARIQTITQDPLSSFDPQFTIEQLLLQP 412
           VI  L  P++G +   G   +AL SE ERRPLR ++Q + Q+P +S +P+  I  ++ +P
Sbjct: 358 VIAGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEP 417

Query: 413 LRLRRDLSPQARQQRILA-LLELVGLSPTLLARRPQSLSGGQRQRISIAQALAAEPEVLV 471
           +R  +    ++  ++I+  LLE VGL      + P   SGGQRQRISIA+ALA  P +L+
Sbjct: 418 IRFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLI 477

Query: 472 CDEPVSALDVTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERG 531
           CDEP SALDV+ QAQ+L+LL  LQ  L+L+M+FISHDL V++ M  R+ VM+ G ++E  
Sbjct: 478 CDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVA 537

Query: 532 TVEQIFNQPQHPYTRQLLS 550
             EQ+F  PQH Y+++L+S
Sbjct: 538 PTEQLFTDPQHEYSKKLIS 556



 Score =  181 bits (458), Expect = 9e-50
 Identities = 97/255 (38%), Positives = 163/255 (63%), Gaps = 8/255 (3%)

Query: 305 LQVDGVSVSFKRPDGSRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVIL-ALQPPDS 363
           L+V  + + +    G    AV +++L ++RGE +G+VGESG+GK+T+G  ++  L PP +
Sbjct: 4   LEVKNLRIEYPSRHGVH-AAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62

Query: 364 ---GDILLSGKPWSALSERERRPLR-ARIQTITQDPLSSFDPQFTIEQLLLQPLRLRRDL 419
              G++ L+G+  S LS +  R +R ++I  I QDP++S +P FT+E  L + +     +
Sbjct: 63  IAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQV 122

Query: 420 SPQARQQRILALLELVGLSP--TLLARRPQSLSGGQRQRISIAQALAAEPEVLVCDEPVS 477
           S +   QR L+L++ VG+      L + P   SGG RQR+ IA ALA EP++++ DEP +
Sbjct: 123 SAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTT 182

Query: 478 ALDVTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQIF 537
           ALDV+ Q Q+L+L+  L ++ ++  + ++HD+GVV +++ R+AVM  G++VE G   ++ 
Sbjct: 183 ALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKVL 242

Query: 538 NQPQHPYTRQLLSTV 552
             P+HPYTR L+S V
Sbjct: 243 GTPEHPYTRSLISAV 257



 Score =  166 bits (419), Expect = 3e-45
 Identities = 111/270 (41%), Positives = 153/270 (56%), Gaps = 20/270 (7%)

Query: 8   PLLRVEGLNVTFPSPHGPVESVR-------NLSFQVNPGEILALVGESGSGKSVTARTLV 60
           PLL+VE +N+ F +     ES R       N+SF V+ GE   LVGESGSGKS  AR + 
Sbjct: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360

Query: 61  GLAGERAQIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIG 120
           GL       Q NA   V  +G   +L  L     ++   R++  V Q+   S++P  +I 
Sbjct: 361 GL------YQPNAGR-VTFEG--IDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIF 411

Query: 121 QEVAEPLLTHKLA-SRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASAL 179
             +AEP+  HKL  S S+    V +LL  VG+   A    +YPHE SGG RQR  IA AL
Sbjct: 412 DIIAEPIRFHKLTRSESETRQIVNDLLEHVGLGKMAG--LKYPHEFSGGQRQRISIARAL 469

Query: 180 AAGPKLLIADEPTTALDATVQQQVLKLFTALA-QAGHGVLLITHDLAVVSQVADQVMVMQ 238
           A  P+LLI DEPT+ALD +VQ Q+L L   L  +    +L I+HDL V+ Q+ D+V VMQ
Sbjct: 470 ATRPRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQ 529

Query: 239 NGALVERGAARQVLSAPQHPYTRRLLAAIP 268
            G L+E     Q+ + PQH Y+++L++ +P
Sbjct: 530 MGTLLEVAPTEQLFTDPQHEYSKKLISLMP 559