Pairwise Alignments

Query, 566 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 593 a.a., peptide transport ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  422 bits (1084), Expect = e-122
 Identities = 250/554 (45%), Positives = 344/554 (62%), Gaps = 22/554 (3%)

Query: 9   LLRVEGLNVTFPSPHGPVESVRNLSFQVNPGEILALVGESGSGKSVTARTLVGLAGE-RA 67
           LL V+ L V   +P GP   V  LSF + PG  L L GESGSGKS+TA +L+ L  +  A
Sbjct: 5   LLSVKDLTVQVATPTGPKVVVERLSFDLLPGRTLCLAGESGSGKSMTALSLMQLLPKPMA 64

Query: 68  QIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQEVAEPL 127
           +I   +  L   DG   ++  L + + +++RGR+IG + Q+ + SL+P+  +G ++   +
Sbjct: 65  RIAGGSATL---DGE--DILALPEARMRRIRGRKIGMIFQEPMTSLNPVMTVGNQLIGAI 119

Query: 128 LTH-KLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALAAGPKLL 186
             H   + R    AR AELL QV IP+P  R  QYPHELSGGLRQR +IA ALA  PK+L
Sbjct: 120 TAHGNTSGRRAARARAAELLDQVQIPEPERRLGQYPHELSGGLRQRIVIAMALAQNPKIL 179

Query: 187 IADEPTTALDATVQQQVLKLFTALAQAGHG--VLLITHDLAVVSQVADQVMVMQNGALVE 244
           IADEPTTALD TVQ Q+L L   L QA HG  V++ITHD+ VV+++AD+V+VM++G  VE
Sbjct: 180 IADEPTTALDVTVQAQILALIRKL-QADHGISVIMITHDMGVVAEMADEVLVMKHGRTVE 238

Query: 245 RGAARQVLSAPQHPYTRRLLAAIPTAATRGNWLAGENPLSQQASTLLSSAGEPGEKSGLA 304
              +R + + PQ  YT+ LL+A+P    R   +AG     + A   + +  EPG +  + 
Sbjct: 239 HATSRDLFAHPQDAYTKELLSAVP----RLGEMAGTETPKRAAGKAVEAGSEPGAEQPM- 293

Query: 305 LQVDGVSVSFKRPDG------SRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVILAL 358
           LQV+ ++V F    G       R+ AV  ISL+V RGETL +VGESG GK+T GK +L L
Sbjct: 294 LQVENLTVRFDIKGGILQRPVRRLHAVEGISLSVRRGETLSLVGESGCGKSTTGKALLNL 353

Query: 359 QPPDSGDILLSGKPWSALSERERRPLRARIQTITQDPLSSFDPQFTIEQLLLQPLRLRRD 418
            P  +GDI + G+    L     RP+   +Q I QDP +S DP+  +  L+ +PL +   
Sbjct: 354 VPW-TGDIRVDGRSTRGLRGSTMRPILRDVQMIFQDPYASLDPRMRVGDLVAEPLVIHGL 412

Query: 419 LSPQARQQRILALLELVGLSPTLLARRPQSLSGGQRQRISIAQALAAEPEVLVCDEPVSA 478
            S    + R+  L + VGLSP  + R P   SGGQRQRI IA+AL+  P+++V DE V+A
Sbjct: 413 ASGSELRDRVEYLFKRVGLSPEQMKRYPHEFSGGQRQRICIARALSLSPKLIVADESVAA 472

Query: 479 LDVTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQIFN 538
           LDV+ QAQVLDLL  +Q    +S +FISHD+ VV+ +SHR+AVM  G  VE GT  QIF 
Sbjct: 473 LDVSIQAQVLDLLQDIQDETGVSYLFISHDMAVVEQISHRVAVMYMGRFVEMGTRRQIFE 532

Query: 539 QPQHPYTRQLLSTV 552
            PQHPYT++L++ V
Sbjct: 533 SPQHPYTKKLMAAV 546



 Score =  186 bits (472), Expect = 2e-51
 Identities = 118/282 (41%), Positives = 157/282 (55%), Gaps = 37/282 (13%)

Query: 5   ASQPLLRVEGLNVTFPSPHGPVE-------SVRNLSFQVNPGEILALVGESGSGKSVTAR 57
           A QP+L+VE L V F    G ++       +V  +S  V  GE L+LVGESG GKS T +
Sbjct: 289 AEQPMLQVENLTVRFDIKGGILQRPVRRLHAVEGISLSVRRGETLSLVGESGCGKSTTGK 348

Query: 58  TLVGLAGERAQIQANAIELVRHDGSRCNLQTLSDRQWQQVRG-------REIGFVLQDAL 110
            L+ L      I        R DG          R  + +RG       R++  + QD  
Sbjct: 349 ALLNLVPWTGDI--------RVDG----------RSTRGLRGSTMRPILRDVQMIFQDPY 390

Query: 111 VSLDPLRRIGQEVAEPLLTHKLASRSDVAARVAELLVQVGI-PDPANRAAQYPHELSGGL 169
            SLDP  R+G  VAEPL+ H LAS S++  RV  L  +VG+ P+   R   YPHE SGG 
Sbjct: 391 ASLDPRMRVGDLVAEPLVIHGLASGSELRDRVEYLFKRVGLSPEQMKR---YPHEFSGGQ 447

Query: 170 RQRALIASALAAGPKLLIADEPTTALDATVQQQVLKLFTALA-QAGHGVLLITHDLAVVS 228
           RQR  IA AL+  PKL++ADE   ALD ++Q QVL L   +  + G   L I+HD+AVV 
Sbjct: 448 RQRICIARALSLSPKLIVADESVAALDVSIQAQVLDLLQDIQDETGVSYLFISHDMAVVE 507

Query: 229 QVADQVMVMQNGALVERGAARQVLSAPQHPYTRRLLAAIPTA 270
           Q++ +V VM  G  VE G  RQ+  +PQHPYT++L+AA+P A
Sbjct: 508 QISHRVAVMYMGRFVEMGTRRQIFESPQHPYTKKLMAAVPVA 549