Pairwise Alignments

Query, 566 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 533 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  393 bits (1009), Expect = e-113
 Identities = 230/549 (41%), Positives = 327/549 (59%), Gaps = 37/549 (6%)

Query: 9   LLRVEGLNVTFPSPHGPVESVRNLSFQVNPGEILALVGESGSGKSVTARTLVGLAGERAQ 68
           +L V GL V F +P G VE+V+ +   V  GE LA+VGESGSGKS T   ++GL  +   
Sbjct: 8   ILAVRGLKVDFYTPDGTVEAVKGIDLDVRSGETLAVVGESGSGKSQTMMGIMGLLAKNGT 67

Query: 69  IQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQEVAEPLL 128
           +  +A    R+ G    L  L+ +   +VRG +I  + Q+ + SLDPL  IG+++AEP++
Sbjct: 68  VTGSA----RYRGQE--LVGLAPKALNKVRGSKITMIFQEPMTSLDPLYTIGRQIAEPIV 121

Query: 129 THKLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALAAGPKLLIA 188
            H+  S  +   RV ELL  VGIP+P  R   YPHELSGG RQR +IA ALA  P +LIA
Sbjct: 122 HHRGGSFKEARRRVLELLELVGIPEPGRRIDSYPHELSGGQRQRVMIAMALANEPDILIA 181

Query: 189 DEPTTALDATVQQQVLKLFTALAQA-GHGVLLITHDLAVVSQVADQVMVMQNGALVERGA 247
           DEPTTALD T+Q Q+L L  +L +  G  ++LITHDL +V   AD+V VM+ G +VE+G 
Sbjct: 182 DEPTTALDVTIQAQILDLLKSLQRRFGMAIVLITHDLGIVKYFADRVAVMRRGEVVEQGM 241

Query: 248 ARQVLSAPQHPYTRRLLAAIPTAATRGNWLAGENPLSQQASTLLSSAGEPGEKSGLALQV 307
              +   P+  YTR LL A P+               ++AS        P + + + L+ 
Sbjct: 242 TADIFERPKGDYTRMLLEAEPSG--------------RKAS--------PPDNAPIILEG 279

Query: 308 DGVSVSFKRPDG------SRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVILALQPP 361
             V+V +  P G      +   AV+ ++L + +G+T+GIVGESGSGK+TLG+ +L L P 
Sbjct: 280 RNVAVDYTIPGGLFRGASAAFRAVDGVNLRLRQGQTIGIVGESGSGKSTLGRALLRLLP- 338

Query: 362 DSGDILLSGKPWSALSERERRPLRARIQTITQDPLSSFDPQFTIEQLLLQPLRLRR-DLS 420
            SG         S       RPLR ++Q + QDP  S  P+ T+ +++ + L +   DLS
Sbjct: 339 SSGYYRFGSTDISGFDRGAMRPLRRQLQLVFQDPYGSLSPRRTVGEIITEGLHVHEPDLS 398

Query: 421 PQARQQRILALLELVGLSPTLLARRPQSLSGGQRQRISIAQALAAEPEVLVCDEPVSALD 480
              R +R +A L+ VGL P    R P   SGGQRQRI+IA+A+  +P+V++ DEP SALD
Sbjct: 399 RADRDRRAIAALKEVGLDPASRNRYPHEFSGGQRQRIAIARAIILKPKVVILDEPTSALD 458

Query: 481 VTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQIFNQP 540
            + Q QV++LL  LQ++  LS +FISHDL VV+ MS  + VMK+G +VE G  + IF+ P
Sbjct: 459 RSVQGQVIELLRDLQEKHGLSYIFISHDLSVVKAMSDYVIVMKNGRIVEEGETDAIFDAP 518

Query: 541 QHPYTRQLL 549
           + PYT+ L+
Sbjct: 519 REPYTKTLI 527



 Score =  146 bits (369), Expect = 2e-39
 Identities = 93/242 (38%), Positives = 138/242 (57%), Gaps = 17/242 (7%)

Query: 28  SVRNLSFQVNPGEILALVGESGSGKSVTARTLVGLAGERAQIQANAIELVRHDGSRCNLQ 87
           +V  ++ ++  G+ + +VGESGSGKS   R L+ L       +  + ++   D       
Sbjct: 302 AVDGVNLRLRQGQTIGIVGESGSGKSTLGRALLRLLPSSGYYRFGSTDISGFD------- 354

Query: 88  TLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQEVAEPLLTHKL-ASRSDVAARVAELL 146
               R   +   R++  V QD   SL P R +G+ + E L  H+   SR+D   R    L
Sbjct: 355 ----RGAMRPLRRQLQLVFQDPYGSLSPRRTVGEIITEGLHVHEPDLSRADRDRRAIAAL 410

Query: 147 VQVGIPDPANRAAQYPHELSGGLRQRALIASALAAGPKLLIADEPTTALDATVQQQVLKL 206
            +VG+ DPA+R  +YPHE SGG RQR  IA A+   PK++I DEPT+ALD +VQ QV++L
Sbjct: 411 KEVGL-DPASRN-RYPHEFSGGQRQRIAIARAIILKPKVVILDEPTSALDRSVQGQVIEL 468

Query: 207 FTALAQAGHGV--LLITHDLAVVSQVADQVMVMQNGALVERGAARQVLSAPQHPYTRRLL 264
              L Q  HG+  + I+HDL+VV  ++D V+VM+NG +VE G    +  AP+ PYT+ L+
Sbjct: 469 LRDL-QEKHGLSYIFISHDLSVVKAMSDYVIVMKNGRIVEEGETDAIFDAPREPYTKTLI 527

Query: 265 AA 266
            A
Sbjct: 528 GA 529