Pairwise Alignments

Query, 566 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  371 bits (953), Expect = e-107
 Identities = 212/551 (38%), Positives = 312/551 (56%), Gaps = 8/551 (1%)

Query: 3   QSASQPLLRVEGLNVTFPSPHGPVESVRNLSFQVNPGEILALVGESGSGKSVTARTLVGL 62
           +  + PLLRVE L +   S       + ++SF++  GEIL ++GESG+GKS     ++GL
Sbjct: 4   EHVTTPLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGL 63

Query: 63  AGERAQIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQE 122
                Q  +  IE    DG   +  T  +R+   +RGR I  + QD   SLDPL  +G +
Sbjct: 64  LSPEFQQTSGTIEF---DGKAIDGMTADERE--TLRGRRISAIFQDHTASLDPLMSVGAQ 118

Query: 123 VAEPLLT-HKLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALAA 181
           V E  L      SR +  AR  +LL +VGIP+P  R   YPH+ SGG RQR +IA ALA 
Sbjct: 119 VEETCLALDSSLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAG 178

Query: 182 GPKLLIADEPTTALDATVQQQVLKLFTALA-QAGHGVLLITHDLAVVSQVADQVMVMQNG 240
            P ++IADEPT+ALDATVQ+QVL+L   L  + G  ++L+THD+ V+S++ ++V+VM+ G
Sbjct: 179 SPDIIIADEPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKG 238

Query: 241 ALVERGAARQVLSAPQHPYTRRLLAAIPTAATRGNWLAGENPLSQQASTLLSSAGEPGE- 299
            +VE      +L  P+H YT++LLAA+P           E+   Q  S  + S   P   
Sbjct: 239 QVVEADRTTAILDQPRHDYTKKLLAAVPRLRIPTRTAKAEDNGRQADSPAIDSDQNPLLI 298

Query: 300 KSGLALQVDGVSVSFKRPDGSRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVILALQ 359
             GL+ Q      ++    G     + ++ + + RG   GIVGESGSGKTT G+++  L 
Sbjct: 299 AEGLSKQFAPQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLD 358

Query: 360 PPDSGDILLSGKPWSALSERERRPLRARIQTITQDPLSSFDPQFTIEQLLLQPLRLRRDL 419
              +G I +   P+       R  L  R+Q I QDP  S +P+ TI + L + +R    +
Sbjct: 359 TAPTGRITIGEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIRFGARI 418

Query: 420 SPQARQQRILALLELVGLSPTLLARRPQSLSGGQRQRISIAQALAAEPEVLVCDEPVSAL 479
                   + A+++ +GL  +LL R P  LSGGQ+QR+ IA+AL A PE++V DEP SAL
Sbjct: 419 RSGEEPADLAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSAL 478

Query: 480 DVTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQIFNQ 539
           DV+ QA+++ LL        ++MVFISHDL +VQ M   + + KDG + + G  E IF++
Sbjct: 479 DVSVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSR 538

Query: 540 PQHPYTRQLLS 550
             +PYTR L++
Sbjct: 539 SDNPYTRALIN 549



 Score =  166 bits (420), Expect = 2e-45
 Identities = 100/251 (39%), Positives = 146/251 (58%), Gaps = 9/251 (3%)

Query: 311 SVSFKRPDGSRMTAV-NNISLTVERGETLGIVGESGSGKTTLGKVILALQPPD----SGD 365
           ++  +   GS  T + +++S  + RGE LGI+GESG+GK+T+G  IL L  P+    SG 
Sbjct: 15  NLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLSPEFQQTSGT 74

Query: 366 ILLSGKPWSALSERERRPLRAR-IQTITQDPLSSFDPQFTI-EQLLLQPLRLRRDLSPQA 423
           I   GK    ++  ER  LR R I  I QD  +S DP  ++  Q+    L L   LS + 
Sbjct: 75  IEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCLALDSSLSRRE 134

Query: 424 RQQRILALLELVGLSPTLLARR--PQSLSGGQRQRISIAQALAAEPEVLVCDEPVSALDV 481
            + R + LL  VG+       R  P   SGGQRQR+ IA ALA  P++++ DEP SALD 
Sbjct: 135 ARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIIIADEPTSALDA 194

Query: 482 TTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQIFNQPQ 541
           T Q QVL+LL  L     +S++ ++HD+GV+  +++R+ VM+ G VVE      I +QP+
Sbjct: 195 TVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVEADRTTAILDQPR 254

Query: 542 HPYTRQLLSTV 552
           H YT++LL+ V
Sbjct: 255 HDYTKKLLAAV 265



 Score =  127 bits (319), Expect = 1e-33
 Identities = 91/282 (32%), Positives = 145/282 (51%), Gaps = 29/282 (10%)

Query: 4   SASQPLLRVEGLNVTFPSPHG---------PVESVRNLSFQVNPGEILALVGESGSGKSV 54
           S   PLL  EGL+  F +P G         P   +R++  ++  G I  +VGESGSGK+ 
Sbjct: 291 SDQNPLLIAEGLSKQF-APQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTT 349

Query: 55  TARTLVGLAGE---RAQIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALV 111
             R L GL      R  I  +  + V   G R  L            GR +  + QD  V
Sbjct: 350 FGRILAGLDTAPTGRITIGEHPFD-VSQSGRRSGLL-----------GR-VQMIFQDPSV 396

Query: 112 SLDPLRRIGQEVAEPLLTHKLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQ 171
           SL+P   IG+ + E +         +  A +A ++ ++G+P   +   ++PH+LSGG +Q
Sbjct: 397 SLNPRMTIGETLDESIRFGARIRSGEEPADLAAMMDRLGLP--RSLLGRHPHQLSGGQKQ 454

Query: 172 RALIASALAAGPKLLIADEPTTALDATVQQQVLKLFT-ALAQAGHGVLLITHDLAVVSQV 230
           R  IA AL A P++++ADEPT+ALD +VQ ++++L    +A+    ++ I+HDLA+V  +
Sbjct: 455 RVCIARALLARPEIIVADEPTSALDVSVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAM 514

Query: 231 ADQVMVMQNGALVERGAARQVLSAPQHPYTRRLLAAIPTAAT 272
              V + ++G + + G    + S   +PYTR L+ A P   T
Sbjct: 515 CSSVYIFKDGRIEDFGPTEFIFSRSDNPYTRALINARPQRFT 556