Pairwise Alignments

Query, 566 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  401 bits (1031), Expect = e-116
 Identities = 232/548 (42%), Positives = 337/548 (61%), Gaps = 35/548 (6%)

Query: 6   SQPLLRVEGLNVTFPSPHGPVESVRNLSFQVNPGEILALVGESGSGKSVTARTLVGLAG- 64
           ++ LL V  L+V F +  G V +V+++S+ ++ GE LA++GESGSGKSV++  ++ L   
Sbjct: 2   AEHLLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDM 61

Query: 65  ERAQIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQEVA 124
              +I +  I L   D     L T+   + ++V GR +  + QD L  L+P+  +G +++
Sbjct: 62  PPGRISSGEILLDGRD-----LLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQIS 116

Query: 125 EPLLTHKLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALAAGPK 184
           E + TH LA  S        LL +VGIP+P     +YPHE SGG RQR +IA ALA  P 
Sbjct: 117 EAMTTHGLAG-SKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPD 175

Query: 185 LLIADEPTTALDATVQQQVLKLFTALA-QAGHGVLLITHDLAVVSQVADQVMVMQNGALV 243
           LLIADEPTTALD TVQ +VLKL   L  + G  VL+ITHDL VVS++AD+V+VM+ GA+V
Sbjct: 176 LLIADEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIV 235

Query: 244 ERGAARQVLSAPQHPYTRRLLAAIPTAATRGNWLAGENPLSQQASTLLSSAGEPGEKSGL 303
           E G  R++   PQHPYT++L+AA P          G+  +            EPG ++  
Sbjct: 236 EAGTVREIYKNPQHPYTQKLIAAAP----------GKGAMH-----------EPGARAEP 274

Query: 304 ALQVDGVSVSFKRPDGSRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVILALQPPDS 363
            L V  V  ++         A+  IS  +  GET+ +VGESGSGK+TL + +L L  PDS
Sbjct: 275 LLSVRDVRKTY-----GSFEALKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDS 329

Query: 364 GDILLSGKPWSALSERERRPLRARIQTITQDPLSSFDPQFTIEQLLLQPLRLRRDLSPQA 423
           G  L  G+   ALS  E   LR  +Q + QDP  S +P+ T+ QL+ +   +  D+ P+A
Sbjct: 330 GTALWKGRDLFALSPAELYKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKA 389

Query: 424 R-QQRILALLELVGLSPTLLARRPQSLSGGQRQRISIAQALAAEPEVLVCDEPVSALDVT 482
           + ++R+  LL  VGLS   ++R P   SGGQRQRI+IA+ALA EP++++CDE VSALDV+
Sbjct: 390 KWRERVAELLVQVGLSAEHMSRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVS 449

Query: 483 TQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQIFNQPQH 542
            QAQV++LL  L++ + ++ +FI+HDL VV+  +  + VM+ G VVE GTV ++F+ P+ 
Sbjct: 450 VQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQ 509

Query: 543 PYTRQLLS 550
            YTR LL+
Sbjct: 510 AYTRALLA 517



 Score =  163 bits (412), Expect = 2e-44
 Identities = 109/263 (41%), Positives = 152/263 (57%), Gaps = 18/263 (6%)

Query: 6   SQPLLRVEGLNVTFPSPHGPVESVRNLSFQVNPGEILALVGESGSGKSVTARTLVGLAGE 65
           ++PLL V  +  T+    G  E+++ +SF + PGE +A+VGESGSGKS  AR L+ L   
Sbjct: 272 AEPLLSVRDVRKTY----GSFEALKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEP 327

Query: 66  RAQIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQEVAE 125
            +     A+   R      +L  LS  +  ++R R++  V QD   SL+P   + Q ++E
Sbjct: 328 DS---GTALWKGR------DLFALSPAELYKLR-RDLQMVFQDPTQSLNPRMTVYQLISE 377

Query: 126 PLLTHK-LASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALAAGPK 184
             + H  +  ++    RVAELLVQVG+   A   ++YPH+ SGG RQR  IA ALA  P+
Sbjct: 378 AWVIHPDILPKAKWRERVAELLVQVGLS--AEHMSRYPHQFSGGQRQRIAIARALALEPQ 435

Query: 185 LLIADEPTTALDATVQQQVLKLFTALA-QAGHGVLLITHDLAVVSQVADQVMVMQNGALV 243
           L+I DE  +ALD +VQ QV++L   L  + G   + I HDL VV   AD VMVMQ G +V
Sbjct: 436 LIICDEAVSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVV 495

Query: 244 ERGAARQVLSAPQHPYTRRLLAA 266
           E G  R+V   P+  YTR LLAA
Sbjct: 496 ELGTVREVFDTPRQAYTRALLAA 518