Pairwise Alignments

Query, 566 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  411 bits (1056), Expect = e-119
 Identities = 235/550 (42%), Positives = 334/550 (60%), Gaps = 31/550 (5%)

Query: 9   LLRVEGLNVTFPSPHGPVESVRNLSFQVNPGEILALVGESGSGKSVTARTLVGLAGER-A 67
           LL V+ L V F S  G   +   +SF V+ GE L ++GESGSGKSV+A  ++GL      
Sbjct: 6   LLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPG 65

Query: 68  QIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQEVAEPL 127
            I A ++     D     L +LS+ + + + GR I  + QD L  L+P+  IG ++ E  
Sbjct: 66  DICAGSVAYRGRD-----LSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVF 120

Query: 128 LTHKLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALAAGPKLLI 187
             H +AS ++   R  E+L +VGIP+P  R  QYPH+ SGG RQR +I  A+A  P++LI
Sbjct: 121 TVHGVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILI 180

Query: 188 ADEPTTALDATVQQQVLKLFTAL-AQAGHGVLLITHDLAVVSQVADQVMVMQNGALVERG 246
           ADEPTTALD +VQ Q+L+L   L A+ G  +++ITHDL V + +AD+V+VM++G +VE G
Sbjct: 181 ADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEG 240

Query: 247 AARQVLSAPQHPYTRRLLAAIPTAATRGNWLAGENPLSQQASTLLSSAGEPGEKSGLALQ 306
            AR V   P H YTR L+ A+P A  R    A   P           AG+P       L+
Sbjct: 241 EARAVFENPAHSYTRTLINALPHADDR----APPRPARP--------AGKP------ILE 282

Query: 307 VDGVSVSFKRPDG-----SRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVILALQPP 361
           V  +   +    G     +R+ AV N+S  V  GET+GIVGESGSGK+T+ +V+L L   
Sbjct: 283 VKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEA 342

Query: 362 DSGDILLSGKPWSALSERERRPLRARIQTITQDPLSSFDPQFTIEQLLLQPLRLRRDLSP 421
             G+ L  G+    +  ++    R ++Q + QDP SS +P+ T+  ++ +P R+ +D+  
Sbjct: 343 SGGEALFHGRDVLKMDRKQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILE 402

Query: 422 QAR-QQRILALLELVGLSPTLLARRPQSLSGGQRQRISIAQALAAEPEVLVCDEPVSALD 480
           + R + R+  LL LVGL+P    R P   SGGQRQRI+IA+ALA +PE++VCDE VSALD
Sbjct: 403 KTRWRDRVTELLGLVGLNPEHAKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALD 462

Query: 481 VTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQIFNQP 540
           V+ Q QV+DLL  L+ RL L+ +FI+HDL +V+H + RI VMK G +VE  T E+IF  P
Sbjct: 463 VSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNP 522

Query: 541 QHPYTRQLLS 550
           QH YTRQL++
Sbjct: 523 QHAYTRQLIN 532



 Score =  170 bits (431), Expect = 1e-46
 Identities = 104/256 (40%), Positives = 147/256 (57%), Gaps = 9/256 (3%)

Query: 305 LQVDGVSVSFKRPDGSRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVILAL--QPPD 362
           L+V  ++V F    G+   A + +S  V+ GETL I+GESGSGK+     I+ L   PP 
Sbjct: 7   LEVKDLTVDFLSLGGA-FRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPG 65

Query: 363 ---SGDILLSGKPWSALSERERRPLRAR-IQTITQDPLSSFDPQFTIEQLLLQPLRLRRD 418
              +G +   G+  S+LSE ERR L  R I  I QDPLS  +P +TI   L +   +   
Sbjct: 66  DICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGV 125

Query: 419 LSPQARQQRILALLELVGLSPT--LLARRPQSLSGGQRQRISIAQALAAEPEVLVCDEPV 476
            S    +QR + +L  VG+      + + P   SGGQRQRI I  A+A  PE+L+ DEP 
Sbjct: 126 ASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPT 185

Query: 477 SALDVTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQI 536
           +ALDV+ QAQ+L+LL  LQ    L+++ I+HDL V  +M+ R+ VMK G +VE G    +
Sbjct: 186 TALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAV 245

Query: 537 FNQPQHPYTRQLLSTV 552
           F  P H YTR L++ +
Sbjct: 246 FENPAHSYTRTLINAL 261



 Score =  158 bits (399), Expect = 6e-43
 Identities = 103/276 (37%), Positives = 153/276 (55%), Gaps = 22/276 (7%)

Query: 2   SQSASQPLLRVEGLNVTFPSPHG------PVESVRNLSFQVNPGEILALVGESGSGKSVT 55
           ++ A +P+L V+ ++  +    G       + +V+NLSF V  GE + +VGESGSGKS  
Sbjct: 273 ARPAGKPILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTV 332

Query: 56  ARTLVGLAGERAQIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDP 115
           AR L+GL       +A+  E + H      +    DR+      R++  V QD   S++P
Sbjct: 333 ARVLLGLN------EASGGEALFHGRDVLKM----DRKQLLAFRRKVQMVFQDPYSSMNP 382

Query: 116 LRRIGQEVAEPLLTHK-LASRSDVAARVAELLVQVGI-PDPANRAAQYPHELSGGLRQRA 173
              +   V+EP   HK +  ++    RV ELL  VG+ P+ A R   YPH+ SGG RQR 
Sbjct: 383 RMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGLNPEHAKR---YPHQFSGGQRQRI 439

Query: 174 LIASALAAGPKLLIADEPTTALDATVQQQVLKLFTALA-QAGHGVLLITHDLAVVSQVAD 232
            IA ALA  P+L++ DE  +ALD +VQ QV+ L   L  + G   + ITHDL +V   AD
Sbjct: 440 AIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFAD 499

Query: 233 QVMVMQNGALVERGAARQVLSAPQHPYTRRLLAAIP 268
           +++VM++G +VE     ++   PQH YTR+L+ A P
Sbjct: 500 RIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINATP 535