Pairwise Alignments

Query, 566 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 536 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  404 bits (1037), Expect = e-117
 Identities = 237/545 (43%), Positives = 331/545 (60%), Gaps = 26/545 (4%)

Query: 8   PLLRVEGLNVTFPSPHGPVESVRNLSFQVNPGEILALVGESGSGKSVTARTLVGLAGERA 67
           PLL V  L V+F       E+VR +SF V  GE +ALVGESGSGKSV+A + V L G+ A
Sbjct: 13  PLLSVRDLRVSFRQDGKVTEAVRGVSFSVGRGETVALVGESGSGKSVSALSTVSLLGDSA 72

Query: 68  QIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQEVAEPL 127
            +  +    V +DG+   +   S+R  +QVRG +I F+ Q+ + SL+PL  I +++AE L
Sbjct: 73  TVSGS----VTYDGTE--MVGASERHLRQVRGNDISFIFQEPMTSLNPLHTIEKQLAESL 126

Query: 128 LTHKLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALAAGPKLLI 187
             H+    +    R+ +LL +VGI D   R   YPH+LSGG RQR +IA ALA  P +LI
Sbjct: 127 ALHQGLGGAAARERIVDLLNRVGIRDAETRLDAYPHQLSGGQRQRVMIAMALANKPDILI 186

Query: 188 ADEPTTALDATVQQQVLKLFTAL-AQAGHGVLLITHDLAVVSQVADQVMVMQNGALVERG 246
           ADEPTTALD T+Q Q+L L   L A  G G+L ITHDL++V ++AD+V VMQ G +VE G
Sbjct: 187 ADEPTTALDVTIQVQILDLLADLKASEGMGLLFITHDLSIVRRIADRVCVMQAGEIVESG 246

Query: 247 AARQVLSAPQHPYTRRLLAAIPTAATRGNWLAGENPLSQQASTLLSSAGEPGEKSGLALQ 306
              ++ + PQHPYTR+LL A PT   +        P+S+ A  L+ +           L+
Sbjct: 247 PTAEIFANPQHPYTRKLLDAEPTGQPQ--------PVSKDAKELIRTED---------LK 289

Query: 307 V-DGVSVSFKRPDGSRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVILALQPPDSGD 365
           V   +   F +     + AVN  SL+V  GETLGIVGESGSGKTTL   I+ L   + G 
Sbjct: 290 VWFPIQKGFLKRTVGHVKAVNPTSLSVRAGETLGIVGESGSGKTTLALAIMRLIASE-GR 348

Query: 366 ILLSGKPWSALSERERRPLRARIQTITQDPLSSFDPQFTIEQLLLQPLRLRRDLSPQARQ 425
           +   G+     S R+ R LRA +Q + QDP  +  P+ T  Q++ + L +      +  +
Sbjct: 349 VEFQGQDLRQWSTRDLRRLRADMQIVFQDPFGALSPRMTCAQIIAEGLAIHNVDQDRDPR 408

Query: 426 QRILALLELVGLSPTLLARRPQSLSGGQRQRISIAQALAAEPEVLVCDEPVSALDVTTQA 485
             +  ++  VGL P  + R P   SGGQRQRI+IA+A+   P+++V DEP SALD+T Q 
Sbjct: 409 DLVAEVMSEVGLDPAFMDRYPHEFSGGQRQRIAIARAMVLRPKLVVLDEPTSALDMTVQV 468

Query: 486 QVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQIFNQPQHPYT 545
           Q+++LL  LQ+R  L+ +FISHDL VV+ MSH++ VMK G+VVE G+  ++FN P  PYT
Sbjct: 469 QIVNLLRDLQERYGLAYLFISHDLNVVRAMSHKMIVMKQGDVVEAGSAAELFNNPSDPYT 528

Query: 546 RQLLS 550
           +QLL+
Sbjct: 529 QQLLA 533



 Score =  150 bits (380), Expect = 9e-41
 Identities = 100/269 (37%), Positives = 148/269 (55%), Gaps = 21/269 (7%)

Query: 6   SQPLLRVEGLNVTFPSPHG-------PVESVRNLSFQVNPGEILALVGESGSGKSVTART 58
           ++ L+R E L V FP   G        V++V   S  V  GE L +VGESGSGK+  A  
Sbjct: 279 AKELIRTEDLKVWFPIQKGFLKRTVGHVKAVNPTSLSVRAGETLGIVGESGSGKTTLALA 338

Query: 59  LVGLAGERAQIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRR 118
           ++ L     +++    +L          +  S R  +++R  ++  V QD   +L P   
Sbjct: 339 IMRLIASEGRVEFQGQDL----------RQWSTRDLRRLRA-DMQIVFQDPFGALSPRMT 387

Query: 119 IGQEVAEPLLTHKLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASA 178
             Q +AE L  H +    D    VAE++ +VG+ DPA    +YPHE SGG RQR  IA A
Sbjct: 388 CAQIIAEGLAIHNVDQDRDPRDLVAEVMSEVGL-DPAFMD-RYPHEFSGGQRQRIAIARA 445

Query: 179 LAAGPKLLIADEPTTALDATVQQQVLKLFTALAQA-GHGVLLITHDLAVVSQVADQVMVM 237
           +   PKL++ DEPT+ALD TVQ Q++ L   L +  G   L I+HDL VV  ++ +++VM
Sbjct: 446 MVLRPKLVVLDEPTSALDMTVQVQIVNLLRDLQERYGLAYLFISHDLNVVRAMSHKMIVM 505

Query: 238 QNGALVERGAARQVLSAPQHPYTRRLLAA 266
           + G +VE G+A ++ + P  PYT++LLAA
Sbjct: 506 KQGDVVEAGSAAELFNNPSDPYTQQLLAA 534