Pairwise Alignments

Query, 284 a.a., HTH-type transcriptional activator RhaR from Dickeya dianthicola ME23

Subject, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 66.6 bits (161), Expect = 6e-16
 Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 11/247 (4%)

Query: 29  QPAFPLHHHDFDELVIVWRGNGLHLWNDVPYRVTCGDLFYVSARDRHSYESVHDLELDNI 88
           Q AF  H+H    + ++ +G          ++V  G +  +S  + H   +       N 
Sbjct: 26  QFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDELHDGHAH-----SNT 80

Query: 89  LYTRERLTLLTDW-QNLLPGGEVPQPQRYWRLAAQSMDTLRDKVENLTQECMKSDPLSLQ 147
            Y  +  ++  +W Q  L   ++ Q   + +L  Q   TL   ++ L    ++ D LS  
Sbjct: 81  GYQVQVFSIEPEWLQQTLEANQIEQVIGFEQLIVQD-PTLFHSLQQL-HHLLRQDNLSQL 138

Query: 148 LSEVLLLQ-IALLALRYRYAPDSTQLADAQQ-LDLLMNVLRASIARPFRLEDFCRLHGLS 205
             + L  Q  A L  RY Y    T     Q  L LL   + + + +P RLE   +L  LS
Sbjct: 139 AKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNLALLKEWVLSQLDQPIRLEQLAQLCQLS 198

Query: 206 MRSLRSRFKQQTGMSVAQYLRQLRLCRAMELLRYNRQTIGEVAAECGFDDSNYFSVVFHQ 265
               +  FK QTG++   +LR+LRL +AM+LL+  +    +VA + GF D  +FS  F  
Sbjct: 199 PTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGT-DVAYQVGFYDQAHFSKAFKA 257

Query: 266 AFGVTPS 272
            +G++PS
Sbjct: 258 TYGLSPS 264