Pairwise Alignments

Query, 284 a.a., HTH-type transcriptional activator RhaR from Dickeya dianthicola ME23

Subject, 273 a.a., positive regulator for rhaBAD operon from Klebsiella michiganensis M5al

 Score =  106 bits (265), Expect = 5e-28
 Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 6/276 (2%)

Query: 6   LKLRAEDYFLTDKNTVTVAERSPQPAFPLHHHDFDELVIVWRGNGLHLWNDVPYRVTCGD 65
           + L  E YF   ++ + +    P+     H H+F ELVIV +G+GLH+ N  P  +  GD
Sbjct: 1   MMLTVEYYFTHPQDKLGMYASDPEDNSHEHSHEFAELVIVEQGHGLHVINGRPLYIQQGD 60

Query: 66  LFYVSARDRHSYESVHDLELDNILYTR-ERLTLLTDWQNLLPGGEVPQPQRYWRLAAQSM 124
           +FYV   D H Y+ +  L+L N+L         L     LL      +   Y  LA  + 
Sbjct: 61  VFYVQPGDVHYYDELGTLKLINVLINPLVEFHYLQQLDTLLQTFSARKAACYGWLAPDTR 120

Query: 125 DTLRDKVENLTQECMKSDPLSLQLSEVLLLQIALLALRYRYAPDSTQLADAQ-QLDLLMN 183
            T ++ V+ +    ++    ++ L E    Q+    L   +A    + ++ + +L  L+ 
Sbjct: 121 HTCKELVDKIFSRELRQAG-NIALREAAFFQLVTTIL---HAETEAEYSNTKYKLHKLLT 176

Query: 184 VLRASIARPFRLEDFCRLHGLSMRSLRSRFKQQTGMSVAQYLRQLRLCRAMELLRYNRQT 243
            L+         +       L+ R+     K+ TG++   YL++LRL  A   LR    T
Sbjct: 177 WLQEHCFEEHNWQQLADKFHLTTRTAFRHIKEATGLTPDNYLKRLRLVSARVKLRETDMT 236

Query: 244 IGEVAAECGFDDSNYFSVVFHQAFGVTPSGYRQRFQ 279
           I EVA  CGF +SN+F+ ++ + FG+TPS  R+R Q
Sbjct: 237 ITEVAYLCGFANSNHFTTLYKKVFGLTPSEDRRRLQ 272