Pairwise Alignments

Query, 309 a.a., TIGR01212 family radical SAM protein from Dickeya dianthicola ME23

Subject, 540 a.a., tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 from Methanococcus maripaludis S2

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 9/138 (6%)

Query: 111 VGLCVGTRPD-CVPDTVLDLLADYHDRGYEVWLELGLQSAHDRTLRRINRGHDFACYRQT 169
           V L + TRPD C    + ++L     R     +ELG+QS +D  L  + RGH      + 
Sbjct: 208 VALTLETRPDYCNEKEINEMLKLGTTR-----VELGIQSTNDEVLEFVKRGHGTDASIKA 262

Query: 170 AQRARARGLKVCSHLIVGLP---GESDEHCLSTLQQVVEAGADGIKLHPLHIVTGSIMAK 226
            Q  +  GLKV  HLI GLP    E D+  + T+ +      D IK +P  ++ G+ + +
Sbjct: 263 TQLLKDSGLKVSYHLIPGLPKTTPEMDKETIKTVFENPNFKPDLIKFYPCLVIPGTEVYE 322

Query: 227 AWGAGRLPELSLARYVSV 244
            W +G    ++  + V V
Sbjct: 323 LWQSGEFNPMTDEQAVEV 340