Pairwise Alignments

Query, 264 a.a., 3'-5' ssDNA/RNA exonuclease TatD from Dickeya dianthicola ME23

Subject, 255 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

 Score =  109 bits (273), Expect = 5e-29
 Identities = 76/257 (29%), Positives = 116/257 (45%), Gaps = 6/257 (2%)

Query: 1   MFDIGVNLTSPQFRSDREQVVARARQAGVTGLLLTGTSAEESERACLLAAQYPDYCWSTA 60
           M D   ++ + +F  DR++V+ARARQ G+  +L+                 YPD C S  
Sbjct: 1   MIDTHAHVYASEFDHDRDEVIARARQVGIEKILMPNIDLNSIAPMLATEKAYPDLCHSMM 60

Query: 61  GVHPHDASGWNDDAAGRIHQLAGSEQVLAIGECGLDFNRNFSTPQEQEQAFSAQLAIAAE 120
           G+HP             I++       +A+GE G+D   + +   EQE AF  QL  A E
Sbjct: 61  GLHPCYVDANVKQTLATIYEWFSRHTFIAVGEIGIDLYWDKTFKAEQEMAFLTQLNWAKE 120

Query: 121 RAMPVFLHCRDAHTRFMALLTPWLGKLPAAVLHCFTGSGDELDDSVRAGLMVGITGWVCD 180
             +PV +H RD+    +ALL          V HCF GS DE       G  +GI G    
Sbjct: 121 LDLPVVIHTRDSLNETLALLKQAQDGRLRGVFHCFGGSVDEAKAINDLGFHLGIGGVSTF 180

Query: 181 ERRGLALRALLPRIPDDRLLLETDAPYLLPRDLHPKPASRRNEPCFLPHIVRQVAAWRGQ 240
           +  G  +  ++P++  + ++LETD PYL P         +RNEP     I  +VA  R  
Sbjct: 181 KNSG--MDQVIPQLDLNYVILETDCPYLAP----VPHRGKRNEPMLTHLISEKVAQLRSL 234

Query: 241 DAEWLGRHVDENARRIF 257
               + +  + N++ +F
Sbjct: 235 PLGEVIKITNNNSKALF 251