Pairwise Alignments

Query, 264 a.a., 3'-5' ssDNA/RNA exonuclease TatD from Dickeya dianthicola ME23

Subject, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

 Score = 68.9 bits (167), Expect = 1e-16
 Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 27/248 (10%)

Query: 17  REQVVARARQAGVTGLLLTGTSAEESERACLLAAQYPDYCWSTAGVHPHDASGWNDDAAG 76
           RE +V RA +  V  ++ +GT+     RA  L  +Y  Y   T G HP   +  +D+A  
Sbjct: 24  REDIVKRAFEKKVQ-MVTSGTNLGSCRRAVELKEKYGIYV--TLGYHPGRVNA-DDNAIE 79

Query: 77  RIHQLAGSEQ--VLAIGECGLDFNRNFSTPQEQEQAFSAQLAIAAERAMPVFLHCRDAHT 134
           +++    S++  +LA+GE GLDF+      + QE  F   + ++ E   PV +H R    
Sbjct: 80  KVYNFIRSKEKEILAVGEIGLDFDA--ENIERQENIFKKFINLSKEVNKPVVIHARGMEE 137

Query: 135 RFMALLTPWLGKLPAAVLHCFTGSGDELDDSVRAGLMVGITGWVCDERRGLALRALLPRI 194
           R   +L   +     ++ HC++GS +   + ++ G  +  +  VC        + L+  +
Sbjct: 138 RSYDILKNDV----ISMYHCYSGSLELAKELIKNGNFISYSTLVCFSEHH---KNLVKNL 190

Query: 195 PDDRLLLETDAPYLLPRDLHPKPASRRNEPCFLPHIVRQVAAWRGQDAEW----LGRHVD 250
             + +++ETD+PYL P          +NEP  + +++  +  W  +  E+    + + + 
Sbjct: 191 GLENVVVETDSPYLSP------IKGEKNEPKNVINVIETI--WELKKDEYSMDEITKIIY 242

Query: 251 ENARRIFR 258
            N +R++R
Sbjct: 243 NNTKRLYR 250