Pairwise Alignments

Query, 632 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  463 bits (1191), Expect = e-134
 Identities = 245/555 (44%), Positives = 352/555 (63%), Gaps = 25/555 (4%)

Query: 22  VLEIDDLSVSFSGRSGTHLALKGVSFSLNKGEVVAVVGESGSGKSVTSLTVMGLLAASAR 81
           +LE+ DL+V F    G   A  GVSF ++ GE + ++GESGSGKSV++  +MGL+     
Sbjct: 6   LLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPP- 64

Query: 82  IERGGIRFIDNAGRRHDLLTMKDDARRRLRGRDMAMIFQEPMTSLNPVLKVGDQLTEALL 141
              G I     A R  DL ++ +  RR L GR +AMIFQ+P++ LNPV  +G QL E   
Sbjct: 65  ---GDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFT 121

Query: 142 DHQMCDAASAERKARELLRKVRIADIDRVMNSYPHSLSGGMRQRVMIAQALACDPQLLIA 201
            H +   A A ++A E+L +V I + ++ ++ YPH  SGG RQR+MI  A+A  P++LIA
Sbjct: 122 VHGVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIA 181

Query: 202 DEPTTALDVTVQARILQILRDLQRQSNMSVLFITHDMGVVAEIADRVVVMYRGEVVEQGT 261
           DEPTTALDV+VQA+IL++L+ LQ +  ++++ ITHD+ V A +ADRV+VM  G +VE+G 
Sbjct: 182 DEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGE 241

Query: 262 VDAIFNRPQHDYTKALLAAVPRLGDMRDSAWPKRFPLLGQQNAAPEQDHTTARYDAPPLL 321
             A+F  P H YT+ L+ A+P   D                 A P      AR    P+L
Sbjct: 242 ARAVFENPAHSYTRTLINALPHADD----------------RAPPR----PARPAGKPIL 281

Query: 322 DIRGLKVYYPIRSGILSSVTHRVHAVEQIDFTVWPGETLAIVGESGCGKSTTGRALLRLV 381
           +++ +  +Y + SG  +    R+HAV+ + F V  GET+ IVGESG GKST  R LL L 
Sbjct: 282 EVKNIDKFYTLSSGFFAKPA-RLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLN 340

Query: 382 ESQSDSLLFDGQEIAGLRDRDFQPLRRKMQMVFQDPYASLNPRLTVGFTIAEPLLLHGLA 441
           E+     LF G+++  +  +     RRK+QMVFQDPY+S+NPR+TV   ++EP  +H   
Sbjct: 341 EASGGEALFHGRDVLKMDRKQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDI 400

Query: 442 KSLEDATPQVQALLKSVGLLPEHAQRYPHEFSGGQRQRIAIARAMALQPQVIIADEAVSA 501
                   +V  LL  VGL PEHA+RYPH+FSGGQRQRIAIARA+A  P++++ DEAVSA
Sbjct: 401 LEKTRWRDRVTELLGLVGLNPEHAKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSA 460

Query: 502 LDVSIQAQVVNLMMDLQQKTGVSWIFISHDMAVVERIANRVAVMYLGQIVEIGPRQSVFN 561
           LDVS+Q QV++L+ +L+ + G+++IFI+HD+ +V   A+R+ VM  G+IVE    + +F 
Sbjct: 461 LDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFR 520

Query: 562 NPQHPYTRRLLASVP 576
           NPQH YTR+L+ + P
Sbjct: 521 NPQHAYTRQLINATP 535



 Score =  190 bits (482), Expect = 2e-52
 Identities = 115/296 (38%), Positives = 176/296 (59%), Gaps = 28/296 (9%)

Query: 318 PPLLDIRGLKVYYPIRSGILSSVTHRVHAVEQIDFTVWPGETLAIVGESGCGKSTTGRAL 377
           P LL+++ L V +    G          A   + F V  GETL I+GESG GKS +  A+
Sbjct: 4   PHLLEVKDLTVDFLSLGGAF-------RATSGVSFHVDAGETLVILGESGSGKSVSASAI 56

Query: 378 LRLVESQ-----SDSLLFDGQEIAGLRDRDFQPLR-RKMQMVFQDPYASLNPRLTVGFTI 431
           + L+++      + S+ + G++++ L + + + L  R++ M+FQDP + LNP  T+G+ +
Sbjct: 57  MGLIDTPPGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQL 116

Query: 432 AEPLLLHGLAKSLEDATPQVQALLKSVGLLPEHAQR---YPHEFSGGQRQRIAIARAMAL 488
            E   +HG+A   E A  +   +L  VG+ PE  +R   YPH+FSGGQRQRI I  A+AL
Sbjct: 117 EEVFTVHGVASGAE-ARQRAIEILGRVGI-PEPEKRIDQYPHQFSGGQRQRIMIGMAIAL 174

Query: 489 QPQVIIADEAVSALDVSIQAQVVNLMMDLQQKTGVSWIFISHDMAVVERIANRVAVMYLG 548
           +P+++IADE  +ALDVS+QAQ++ L+  LQ + G++ I I+HD+ V   +A+RV VM  G
Sbjct: 175 RPEILIADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSG 234

Query: 549 QIVEIGPRQSVFNNPQHPYTRRLLASVPIADPNRRYARELDDSEIPSPLRKANEVV 604
           +IVE G  ++VF NP H YTR L+ ++P A          DD   P P R A + +
Sbjct: 235 RIVEEGEARAVFENPAHSYTRTLINALPHA----------DDRAPPRPARPAGKPI 280



 Score =  174 bits (442), Expect = 7e-48
 Identities = 103/275 (37%), Positives = 158/275 (57%), Gaps = 21/275 (7%)

Query: 17  PAPQPVLEIDD------LSVSFSGRSGTHLALKGVSFSLNKGEVVAVVGESGSGKSVTSL 70
           PA +P+LE+ +      LS  F  +     A+K +SF +  GE + +VGESGSGKS  + 
Sbjct: 275 PAGKPILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVAR 334

Query: 71  TVMGLLAASARIERGGIRFIDNAGRRHDLLTMKDDARRRLR-GRDMAMIFQEPMTSLNPV 129
            ++GL  AS     GG          H    +K D ++ L   R + M+FQ+P +S+NP 
Sbjct: 335 VLLGLNEAS-----GGEALF------HGRDVLKMDRKQLLAFRRKVQMVFQDPYSSMNPR 383

Query: 130 LKVGDQLTEALLDHQ-MCDAASAERKARELLRKVRIADIDRVMNSYPHSLSGGMRQRVMI 188
           + V D ++E    H+ + +      +  ELL  V +         YPH  SGG RQR+ I
Sbjct: 384 MTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGLNP--EHAKRYPHQFSGGQRQRIAI 441

Query: 189 AQALACDPQLLIADEPTTALDVTVQARILQILRDLQRQSNMSVLFITHDMGVVAEIADRV 248
           A+ALACDP+L++ DE  +ALDV+VQ +++ +L +L+ +  ++ +FITHD+ +V   ADR+
Sbjct: 442 ARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRI 501

Query: 249 VVMYRGEVVEQGTVDAIFNRPQHDYTKALLAAVPR 283
           +VM  GE+VE  T + IF  PQH YT+ L+ A P+
Sbjct: 502 IVMKSGEIVEHATTEEIFRNPQHAYTRQLINATPK 536