Pairwise Alignments

Query, 944 a.a., DNA polymerase I from Dickeya dianthicola 67-19

Subject, 924 a.a., DNA polymerase A (NCBI) from Rhodospirillum rubrum S1H

 Score =  709 bits (1830), Expect = 0.0
 Identities = 408/945 (43%), Positives = 566/945 (59%), Gaps = 36/945 (3%)

Query: 9   LILVDGSSYLYRAYHAFPPLTNGAGEPTGAMYGVLNMLRSLLQQYHPSHVAVVFDAKGKT 68
           L LVDGS Y++RAYH+ PP+T   G P  A+YG   ML  LL      H+AV+FD    +
Sbjct: 7   LYLVDGSGYIFRAYHSLPPMTRTDGTPVNAVYGFTAMLMKLLADMDADHLAVIFDKARVS 66

Query: 69  FRDDLFEHYKSHRPPMPDDLRAQIEPLHRMVKAMGLPLLSVSGVEADDVIGTLAQQAERA 128
           FR++++  YK+ RPP P+DL  Q   +   V+A  +P +   G EADD+I T A++A   
Sbjct: 67  FRNEIYPLYKAQRPPPPEDLIPQFPLIREAVRAFNVPCIERDGFEADDLIATYAKRARAE 126

Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMNNTILGPDEVCAKYGIPPSLIIDFLALMGDSSD 188
           G  V + + DKD+ QLV   + L + M N  +GP EV  K+G+ P  +ID  AL GD+ D
Sbjct: 127 GAIVTVVSSDKDLMQLVGEGVALFDPMKNRAIGPAEVFEKFGVAPDKVIDVQALAGDAVD 186

Query: 189 NIPGVPGVGEKTAQALLAGLGGLDALYADLDKIAGLTFRGAKTMAAKLEQNKEVAYLSYQ 248
           N+PGVPG+G KTA  L+   G L+ L A   +I     R +      L  + E A +S Q
Sbjct: 187 NVPGVPGIGVKTAAQLIGEYGDLETLLARAAEIKQPKRRQS------LLDHAEAARISLQ 240

Query: 249 LATIKTDVELELGCEQLTVNEPDAVELRELFTRYEFKRWLADVEAGQWLQGGKKTPPAMP 308
           L  ++ DVE+          EPDA  L        F+  LA V A               
Sbjct: 241 LVRLRDDVEVSETLADFATAEPDAEVLAGFLAENGFRSLLARVTA--------------- 285

Query: 309 FVKATAGGEPKEAASVLSQDGYVTILDEKVLLDWLERIKTAALFSFDTETDGLDTLTANL 368
              A AG  P+ AA+  + D YV +     L  W+ + + A L + DTETD L    A L
Sbjct: 286 VAHAKAGTTPQPAAAP-ADDDYVLVNTLAELGVWIAKARAAGLVAIDTETDSLKARRATL 344

Query: 369 VGVSLAIKPGEAAYLPLGHITSRVYSSNIYSSTVSPATRMSTQLGRDRVLALLKPLLEDE 428
           VGVSLAI PG A Y+P  H   +    + +     P   +  +      LALL  LL D 
Sbjct: 345 VGVSLAITPGRACYIPFAHGLRKAEGLD-FDGAAPPVANIEDKAA---ALALLGDLLRDP 400

Query: 429 GIRKIGQNLKFDKGVMARCGIDLRGIAFDTMLESYVLDSVAGRHDMDSLSERYLQHKTIT 488
           G+ K+G NLKFD  V+A  G+       DTM+ SYVLD     H MD L+  +L  +TIT
Sbjct: 401 GVLKVGHNLKFDLHVLANAGLSDVAPVDDTMVLSYVLDGTLHGHGMDELAGLHLGRRTIT 460

Query: 489 FEEIAGKGKNQLTFDRIPLAQASVYAAEDADVTLRLHETLWAKLEPQQELRKVFQNIDMP 548
           FEE+ GKGK Q+TFD++PL +A  YAAEDADVTLRL+  L  +L  +  +R V + +D P
Sbjct: 461 FEEVCGKGKGQITFDQVPLDKAVAYAAEDADVTLRLYLLLRDRLLKEHMVR-VHETLDRP 519

Query: 549 LVPVLSRIERTGVLINTAILAEHSRELTQRLAELEVQAHELAGEAFNLSSPKQLGAILYE 608
           +V +L+ +E  GV ++   L   S +  +R+ +LE Q H LAG AFN++SPKQLG +L+E
Sbjct: 520 MVRILTDMEAAGVRVDALRLKALSGDFAKRMGDLEDQIHALAGHAFNVASPKQLGEVLFE 579

Query: 609 KLQLPVIKKTPK-GAPSTNEEVLVELALD-YPLPKLILEHRGLAKLKSTYTDKLPQMINP 666
           ++ L   KK+ K GA ST+ +VL +LA + + LP  +L+ R  AKLK TYTD L   I+ 
Sbjct: 580 EMSLTGGKKSRKTGAWSTDAQVLDQLAAEGHDLPARVLDWRQYAKLKGTYTDALVAEIDE 639

Query: 667 LTKRVHTSYHQAVTATGRLSSSDPNLQNIPVRNEEGRRIRQAFIAPEGYRILAADYSQIE 726
            T RVHT+Y   VTATGRLSS+DPNLQNIPVR+E GR+IR+AFIA  G+ +++ADYSQIE
Sbjct: 640 RTGRVHTTYGLTVTATGRLSSNDPNLQNIPVRSEAGRKIREAFIAAPGHLLISADYSQIE 699

Query: 727 LRIMAHLSRDAGLLRAFSHGLDIHRATAAEVFGLPLDRVTTEQRRSAKAINFGLIYGMSA 786
           LR++AH++    L +AF+ G DIH  TA++VFG+P++ +    RR AKAINFG+IYG+SA
Sbjct: 700 LRLVAHVAGITALRQAFAEGKDIHAITASQVFGVPVEGMDPMVRRQAKAINFGIIYGISA 759

Query: 787 FGLSRQLAIPRNEAQKYMNLYFERYPGVQEYMERTRQQAAAQGYVSTLDGRRLYLPDIHS 846
            GL++QL + R EA  ++  YF R+P ++ YME  +++A   G+V+T  GRR+ +P I  
Sbjct: 760 HGLAQQLGVGRPEAAAFITAYFARFPEIRSYMETVKEEARTVGWVATPFGRRIPIPGIQD 819

Query: 847 RNANSRKAAERAAINAPMQGTAADIIKKAMIAIDAWLQQEKPLVTMLMQVHDELVFEVHH 906
           +N  +R  AER AINAP+QG AADIIK+AMIA+   L+Q      ML+QVHDEL+FE   
Sbjct: 820 KNPAARAFAERQAINAPIQGGAADIIKRAMIALPPALEQAGLATRMLLQVHDELIFEAPE 879

Query: 907 SVLDEASEKIRNLMEGCMQL-------DVPLQVDIGTGSNWDQAH 944
           +  + A+  ++ +ME  + L        VPL+VD G  ++W +AH
Sbjct: 880 AEAETAAALVKRVMETAVTLTDDQGERTVPLEVDTGIAASWAEAH 924