Pairwise Alignments

Query, 1335 a.a., trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase from Dickeya dianthicola 67-19

Subject, 1059 a.a., proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) (from data) from Shewanella oneidensis MR-1

 Score =  880 bits (2274), Expect = 0.0
 Identities = 486/1051 (46%), Positives = 660/1051 (62%), Gaps = 51/1051 (4%)

Query: 93   LRSAITAAYRRPETEMVPMLLEQARMPDAVSYAASALAAGLAEKLRRQKNSGGRAGMVQS 152
            L  A+T  Y   E + +  L++     D      +  A  L  K+R+ +  G   G + +
Sbjct: 20   LFKAVTDNYIVDEEQYLSELIKLVPSSDEAIERVTRRAHELVNKVRQFEKKGLMVG-IDA 78

Query: 153  LLQEFSLSSQEGVALMCLAEALLRIPDKPTRDALIRDKISTGNWQSHVGRSASLFVNAAA 212
             LQ++SL +QEG+ LMCLAEALLRIPD  T DALI DK+S   W  H+ +S S+ VNA+ 
Sbjct: 79   FLQQYSLETQEGIILMCLAEALLRIPDAATADALIEDKLSGAKWDEHLSKSDSVLVNAST 138

Query: 213  WGLLVTGKLVSTHN--ESHLSGALNRIISKSGEPLVRKGVDIAMRLMGEQFVTGETIAEA 270
            WGL++TGK+VS     +   S  L R++++ GEP++R+ +  AM++MG+QFV G T+ EA
Sbjct: 139  WGLMLTGKIVSLDKKIDGSSSNLLGRLVNRLGEPVIRQAMMAAMKIMGKQFVLGRTMKEA 198

Query: 271  LANARKREERGFRYSYDMLGEAALTGDDAEAYLASYQQAIHAIGKAASGRGIYEGPGISI 330
            L N+  + + G+ +SYDMLGEAALT  DAE Y   Y  AI  +G  +        P ISI
Sbjct: 199  LKNSEDKRKLGYTHSYDMLGEAALTRKDAEKYFTDYANAITELGAQSYNESESPRPTISI 258

Query: 331  KLSALHPRYGRAQYERVMDELYPRLLALTLLARQYDIGINIDAEEADRLELSLDLLERLC 390
            KLSALHPRY  A  +RV+ ELY  ++ L  LAR  +IGI+IDAEE DRLELSL L ++L 
Sbjct: 259  KLSALHPRYEVANEDRVLTELYDTVIRLIKLARGLNIGISIDAEEVDRLELSLKLFQKLF 318

Query: 391  FEPRLAGWNGIGFVIQAYQKRCPFVIDVLVDLARRSQRRLMIRLVKGAYWDSEIKRAQLD 450
                  GW  +G V+QAY KR   V+  L  LA+     + +RLVKGAYWDSE+K AQ  
Sbjct: 319  NSEATKGWGLLGIVVQAYSKRALPVLVWLTRLAKEQGDEIPVRLVKGAYWDSELKWAQQA 378

Query: 451  GLEGYPVYTRKLYTDVSYLACARRLL--AAPNLIYPQFATHNAHTLSAIYHLAGNNYYPG 508
            G   YP+YTRK  TDVSYLACAR LL  A    IYPQFA+HNA T++AI  +AG+     
Sbjct: 379  GEAAYPLYTRKAGTDVSYLACARYLLSDATRGAIYPQFASHNAQTVAAISDMAGDR---- 434

Query: 509  QYEFQCLHGMGEPLYEQVVGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSF 568
             +EFQ LHGMG+ LY+ ++ +       +  RIYAP+G H+ LL YLVRRLLENGANTSF
Sbjct: 435  NHEFQRLHGMGQELYDTILSEAG----AKAVRIYAPIGAHKDLLPYLVRRLLENGANTSF 490

Query: 569  VNRIADPSVALEALVADLVSETEALAARDGLVGQPHPRIPLPRALYGSVRRNASGLDLSS 628
            V+++ DP   +E+LV   V   + L +   L      +I LP  ++GS R+N+ GL+++ 
Sbjct: 491  VHKLVDPKTPIESLV---VHPLKTLTSYKTLANN---KIVLPIDIFGSDRKNSKGLNMNI 544

Query: 629  EHRLASLSSALLTSAARSWQAQPMLAVDQVEQVEPAEADDAGGDSRPVVNPAEPRDVVGY 688
                    +AL    +  WQA P++                 G+ + +V+P +    VG 
Sbjct: 545  ISEAEPFFAALDKFKSTQWQAGPLV-----------NGQPLTGEHKTIVSPFDTTQTVGQ 593

Query: 689  VREAQPQHIALALEQAVSAGDIWFATPAAERAAILSRAADLLESRQQHLLGLLVREAGKT 748
            V  A    I  A+  A +A   W  TP   RA+ L + ADLLE  ++ L+ L  REAGK+
Sbjct: 594  VAFADKAAIEQAVSSAHAAFGSWTRTPVEVRASALQKLADLLEENREELIALCTREAGKS 653

Query: 749  LANAVAEVREAVDFLRYYAAQVSETFNNHDYRP-------------LGAVVCISPWNFPL 795
            + + + EVREAVDF RYYA Q  +  +  +  P              G  VCISPWNFPL
Sbjct: 654  IQDGIDEVREAVDFCRYYAVQAKKLMSKPELLPGPTGELNELFLQGRGVFVCISPWNFPL 713

Query: 796  AIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVQMLREAGVPAGALQLLPGAGETVGAAL 855
            AIF GQ++AALAAGN+V+AKPAEQT +I  +AVQ+  +AG+P   LQ LPG G TVG AL
Sbjct: 714  AIFLGQVSAALAAGNTVVAKPAEQTSIIGYRAVQLAHQAGIPTDVLQYLPGTGATVGNAL 773

Query: 856  VSDDRVRGVMFTGSTAVAAQLQRTLAGRLDPQGRTTPLIAETGGINAMIVDSSALTEQVV 915
             +D+R+ GV FTGST  A  + RTLA R   +G   PLIAETGG NAM+VDS++  EQVV
Sbjct: 774  TADERIGGVCFTGSTGTAKLINRTLANR---EGAIIPLIAETGGQNAMVVDSTSQPEQVV 830

Query: 916  TDVVASAFDSAGQRCSALRLLCVQEEVADKTLVMLRGAMAECRLGNPERLSTDIGPLIDA 975
             DVV+S+F SAGQRCSALR+L +QE++AD+ + +L+GAM E  +GNP  + TD+GP+IDA
Sbjct: 831  NDVVSSSFTSAGQRCSALRVLFLQEDIADRVIDVLQGAMDELVIGNPSSIKTDVGPVIDA 890

Query: 976  EAKQRIERHIQTLRAKGRPVFQAAWPNSQDQQEWARGHFIPPTLIELESVDDLRQEVFGP 1035
             AK  ++ HI  ++  G+ + Q + P   +      GHF+ PT +E++S+  L +E FGP
Sbjct: 891  TAKANLDAHIDHIKQVGKLIKQMSLPAGTE-----NGHFVAPTAVEIDSIKVLEKEHFGP 945

Query: 1036 VLHVVRYSRNQLDALIGHINAAGYGLTLGLHTRIDETINRVTSQAKVGNLYVNRNMVGAV 1095
            +LHV+RY  ++L  +I  IN+ G+GLTLG+H+R +     V  +  VGN+Y+NRN +GAV
Sbjct: 946  ILHVIRYKASELAHVIDEINSTGFGLTLGIHSRNEGHALEVADKVNVGNVYINRNQIGAV 1005

Query: 1096 VGVQPFGGEGLSGTGPKAGGPLYLHRLLSHR 1126
            VGVQPFGG+GLSGTGPKAGGP YL R ++ +
Sbjct: 1006 VGVQPFGGQGLSGTGPKAGGPHYLTRFVTEK 1036



 Score = 44.3 bits (103), Expect = 6e-08
 Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 39/196 (19%)

Query: 1154 AGLQALASWARQAQRDVLVSCCQRYAELTQSGIVRV-----------------------L 1190
            + LQ LA    + + +++  C +   +  Q GI  V                       L
Sbjct: 626  SALQKLADLLEENREELIALCTREAGKSIQDGIDEVREAVDFCRYYAVQAKKLMSKPELL 685

Query: 1191 PGPTGERDTYTLLPRERVLCVADNDDDALV---QLAAVLAVGSRALWVEAPEWQAL-YRQ 1246
            PGPTGE +   L  R   +C++  +    +   Q++A LA G+  +   A +   + YR 
Sbjct: 686  PGPTGELNELFLQGRGVFVCISPWNFPLAIFLGQVSAALAAGNTVVAKPAEQTSIIGYRA 745

Query: 1247 LPEAVQARV------------AFCRDGVTDDSRFDAVIFHGDADRLRHLSEQLAQRDGAI 1294
            +  A QA +            A   + +T D R   V F G     + ++  LA R+GAI
Sbjct: 746  VQLAHQAGIPTDVLQYLPGTGATVGNALTADERIGGVCFTGSTGTAKLINRTLANREGAI 805

Query: 1295 VGVQGLSRGETDIVLE 1310
            + +   + G+  +V++
Sbjct: 806  IPLIAETGGQNAMVVD 821



 Score = 30.0 bits (66), Expect = 0.001
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 9/53 (16%)

Query: 1292 GAIVGVQ-----GLS----RGETDIVLERLLIERSLSINTAAAGGNASLMTIG 1335
            GA+VGVQ     GLS    +      L R + E++ + N  A GGNA+L+++G
Sbjct: 1003 GAVVGVQPFGGQGLSGTGPKAGGPHYLTRFVTEKTRTNNITAIGGNATLLSLG 1055