Pairwise Alignments

Query, 658 a.a., biosynthetic arginine decarboxylase from Dickeya dianthicola 67-19

Subject, 637 a.a., biosynthetic arginine decarboxylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  716 bits (1848), Expect = 0.0
 Identities = 353/636 (55%), Positives = 460/636 (72%), Gaps = 6/636 (0%)

Query: 27  MNDRDASEMLRTYNIAWWGNNYYDVNELGHISVCPDPDVPEARVDLAKLVKTRQQDNQRL 86
           MND         YN+  W   +Y +++ G ++V PDP  P+ ++ L +L K   +    L
Sbjct: 1   MNDWSIEAARAGYNVTHWSQGFYGISDEGEVTVSPDPKNPDHKIGLNELAKDMVKAGVAL 60

Query: 87  PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLINSGEP-- 144
           P L  FPQIL HR+ S+  AF +A + + Y+  Y LVYPIKVNQ + V+E ++ S     
Sbjct: 61  PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQKTVVEEILASQASKE 120

Query: 145 ---LGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMS 201
              LGLEAGSK ELMAVLA A    SVIVCNGYKD EYIRLALIGEKLGHKVY+V+EK+S
Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS 180

Query: 202 EINLVLEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVELLRKAN 261
           E+ +VL E++RL V PRLG+RARLA QG GKWQ+SGGEKSKFGL+A Q+L +V+ L++++
Sbjct: 181 ELKMVLAESKRLGVKPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILTVVDQLKQSD 240

Query: 262 RLDSLQLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTR 321
            LDSLQLLHFHLGSQ+ANIRDI  GV E+ARFY EL +LG +I CFDVGGGL VDY+GTR
Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAARFYCELRELGASINCFDVGGGLAVDYDGTR 300

Query: 322 SQSDCSVNYGLNEYANNVIWGIGDACNEYGLPHPTVITESGRAVTAHHTVLVSNIIGVER 381
           SQS+ S+NYGL+EYANN++  + D CNEY  P P +I+ESGR +TAHH VL++++IG E 
Sbjct: 301 SQSNNSMNYGLSEYANNIVNVLTDICNEYEQPMPRIISESGRHLTAHHAVLITDVIGTEA 360

Query: 382 NEFSEPVAPDEDAPRALESLWSTWQQIQEPANRRSLREWLHDSQMDLNDVHTQYTHGMLD 441
            +  +   P+E++P+ L ++W +W ++   A++R+L E  HDSQ DL +  + +  G L 
Sbjct: 361 YQVEDIQPPEEESPQLLHNMWQSWTELSGRADQRALIEIYHDSQSDLQEAQSLFALGQLS 420

Query: 442 LTQRAQAEQLYLNICQRLQQQLDPSNRAHRPIIDELQERMADKLYVNFSLFQSMPDAWGI 501
           L +RA AEQ  L +C  +Q  L   NR HRPIIDEL E++ADK +VNFSLFQS+PDAWGI
Sbjct: 421 LAERAWAEQANLRVCHEVQGLLSTKNRYHRPIIDELNEKLADKFFVNFSLFQSLPDAWGI 480

Query: 502 DQLFPVLPLEGLDKPPQRRVVLLDITCDSDGAIDHYVDGDGVATTMPMPPYDPENPPLLG 561
           DQ+FPVLPL GLDK P+RR V+LDITCDSDG +D YVDG G+ TT+P+P +  E+P L+G
Sbjct: 481 DQVFPVLPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPVPAWSAESPYLIG 540

Query: 562 FFMVGAYQEILGNMHNLFGDTSTVDVFVFQDGTVELEESDEGNTVADMLEYVQLDPNVLM 621
           FFMVGAYQEILG+MHNLFGDT++  V + ++G   +E    G+TVAD+L YV LD    M
Sbjct: 541 FFMVGAYQEILGDMHNLFGDTNSAVVSIEENGMTNIESVLAGDTVADVLRYVNLDAVDFM 600

Query: 622 SRFRDQVKETDLAPELQAQFLEEFETGLYGYTYLED 657
             + + V +  +A + +AQ LEE + GL GYTYLED
Sbjct: 601 RTYEELVNQ-HIAEDERAQILEELQVGLKGYTYLED 635