Pairwise Alignments

Query, 294 a.a., small-conductance mechanosensitive channel MscS from Dickeya dianthicola 67-19

Subject, 274 a.a., Small-conductance mechanosensitive channel from Pseudomonas stutzeri RCH2

 Score =  204 bits (518), Expect = 2e-57
 Identities = 111/275 (40%), Positives = 166/275 (60%), Gaps = 5/275 (1%)

Query: 3   ELNVAESMGRLQSWLVNNQHILLQYAVNIVASMVILCVGMIVARMMSNTMSRLMVARGID 62
           +L+V   +   +SWL     ++LQY   +  +++    G  +   ++  +S L+  R +D
Sbjct: 2   DLSVDYLVDLSESWLP----VVLQYGAQVTLALLTFLFGWWLINTLTAKVSSLLQRRQVD 57

Query: 63  VTVADFLSALVRYGIIAFTLIAALSRVGVQTTSVIAVLGAAGLAVGLALQGSLSNFAAGV 122
            T+  F+ +L    +    L++  S +GV+TTS IAV+GAAGLA+GLALQGSL+NFA GV
Sbjct: 58  PTLHGFIGSLASVVLKVLLLVSVASMIGVETTSFIAVIGAAGLAIGLALQGSLANFAGGV 117

Query: 123 LLVVFRPFRTGESVDLGGVAGTVTQVQIFSTTLLTADGKVIVVPNGKIIAGNITNSSREP 182
           L+++FRPFR GE ++  G+AGTV  +QIF T L T D K +VVPNG +  G+ITN SREP
Sbjct: 118 LILLFRPFRVGEWIEAQGIAGTVNSIQIFHTVLKTGDNKTVVVPNGALSNGHITNFSREP 177

Query: 183 DCRTEIIVGVAYDADIDVVKKVLGDIVAADTRIQHDKGVTIRLNEMGAYSLNFVVRVWSA 242
             R +I +G+ Y +DI + ++VL +I A D R+  +    + +  +G  S+N  +RVW A
Sbjct: 178 RRRADINIGIDYSSDIKLARQVLLEI-AEDPRVLREPEPVVFVTGLGDSSVNLSLRVWVA 236

Query: 243 NGDAAAVNWDLLESFKRALDEHRIGIPYPQMDVHL 277
             D   V +   E  K  L    +GIP+PQ  VHL
Sbjct: 237 TADFWPVTFSFTEQAKERLTAVGVGIPFPQRVVHL 271