Pairwise Alignments

Query, 294 a.a., small-conductance mechanosensitive channel MscS from Dickeya dianthicola 67-19

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score =  153 bits (387), Expect = 8e-42
 Identities = 84/268 (31%), Positives = 145/268 (54%), Gaps = 5/268 (1%)

Query: 13  LQSWLVNNQHILLQYAVNIVASMVILCVGMIVARMMSNTMSRLMVARGIDVT--VADFLS 70
           L +WL +N    +Q+   +   ++IL      A++    +   + ++ I ++  + DF  
Sbjct: 290 LVNWLASNA---VQHLFQLFIFLLILLAAKGGAKVTRTVVRSAVNSKNIRISHLMQDFFV 346

Query: 71  ALVRYGIIAFTLIAALSRVGVQTTSVIAVLGAAGLAVGLALQGSLSNFAAGVLLVVFRPF 130
           ++    +    ++  LS++G+    V+   G AG+ +G ALQ +LSNFAAG++L+++RPF
Sbjct: 347 SMSGKVVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPF 406

Query: 131 RTGESVDLGGVAGTVTQVQIFSTTLLTADGKVIVVPNGKIIAGNITNSSREPDCRTEIIV 190
             G+ V  GGV G V+ + + +TT+ T D ++I+VPN KI    I N + E   R +++ 
Sbjct: 407 DVGDFVHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVF 466

Query: 191 GVAYDADIDVVKKVLGDIVAADTRIQHDKGVTIRLNEMGAYSLNFVVRVWSANGDAAAVN 250
           G+ Y  D+   + VL DIV +   +       I+++ +   S++F+VR W    D   V 
Sbjct: 467 GIGYSDDLLKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTDDYWDVY 526

Query: 251 WDLLESFKRALDEHRIGIPYPQMDVHLH 278
           WD+ +  K   D   I IP+PQ DVHLH
Sbjct: 527 WDVTKEVKLRFDREGISIPFPQQDVHLH 554