Pairwise Alignments

Query, 791 a.a., DNA polymerase II from Dickeya dianthicola 67-19

Subject, 787 a.a., DNA polymerase II from Vibrio cholerae E7946 ATCC 55056

 Score =  816 bits (2107), Expect = 0.0
 Identities = 428/790 (54%), Positives = 549/790 (69%), Gaps = 13/790 (1%)

Query: 8   QGFVLTRHWQDTPAGIQVECWLATNTGPCRVRLSPQQAVAFVPMRHQARITQLLSGEKHW 67
           QGFVLTRH +D     Q+E WLAT +GP ++ +  ++ V F+       + ++ +     
Sbjct: 5   QGFVLTRHARDVAGQTQIELWLATPSGPTQLTIRGERPVFFIEQSASQEVMRIAAELSIT 64

Query: 68  -QLRPLALKNFHHEPQLGLYCLHYRQLLRLEKKLQEAGIAVYEADIRPPERFLMERFITA 126
             L PL+L++F  +P    YC   R    L +KL +A + + EADIR  +RFLMERFI  
Sbjct: 65  PSLAPLSLRSFAGQPLAACYCNTIRDSQILAEKLAQADMLILEADIRLADRFLMERFIQG 124

Query: 127 PVWFSGEEAADGLIDQVRLKPAP--DYRPPLKTVSLDIETSRHGELYCIGLEGCGQRQVF 184
            + F+G+    G   QV+       DY P L  VSLDIE S  G LY IGL+     +V 
Sbjct: 125 SIEFTGQITDFGHYRQVQQAKCRQGDYLPTLNMVSLDIECSEKGLLYSIGLDSPMDSRVI 184

Query: 185 MLGPENGNADDAGDLTLEYVASRPQLLEKLNQWLHTHDPDVIIGWNLVQFDLRVLQQHAE 244
           M+G       +  +  +++V    QLL+ L  W    DPDVIIGW++V FD R+L + AE
Sbjct: 185 MIGQP-----EPAETPIQWVEDEYQLLKALIAWFEQFDPDVIIGWSVVDFDFRLLHKRAE 239

Query: 245 RYRIPLRLGRNGQELEWREHGYRQGHFFAGAPGRLIVDGIEALKSATWNFASFSLEFVSR 304
            +++ L +GR  Q   +R     Q  F +  PGR+++DGI+ LK+AT++F S+SLE VS+
Sbjct: 240 FHKLKLTIGRAQQPSFFRTASQTQQGFIS-IPGRVVLDGIDTLKTATYHFRSWSLESVSQ 298

Query: 305 SLLGEGKASDNPYQRLEEIEQRFQQDKPALARYNLKDCELVTRIFEKTHLMSFLLERASV 364
            LLGEGKA  N + R++EI Q F+ DKP+LARYNL+DC LV +IF  THL+ F ++R+ +
Sbjct: 299 ELLGEGKAIHNVHDRMDEINQMFRHDKPSLARYNLQDCVLVNKIFAATHLLDFAIQRSRL 358

Query: 365 TGLAADRSGGSVAAFTHLYLPRMHRAGFVAPNLGEVPPEASPGGYVMDSRPGLYDSVLVL 424
           TG+  DR GGSVAAFT+LYLP++HRAG+VAPNL      ASPGGYVMDS PGLYDSVLVL
Sbjct: 359 TGVELDRIGGSVAAFTNLYLPQLHRAGYVAPNLQPENWVASPGGYVMDSIPGLYDSVLVL 418

Query: 425 DYKSLYPSIIRTFLIDPVGLVTGLQQP---DEQHAVEGFRGAWFSRRHHCLPAIVEGIWH 481
           D+KSLYPSIIR+FLIDP+GL+ GL+ P      HAV GFRG  F R  H LP ++E +W 
Sbjct: 419 DFKSLYPSIIRSFLIDPLGLIEGLKLPIGKQADHAVPGFRGGQFHRTKHFLPEMIEKLWA 478

Query: 482 ERDLAKQQNNQPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHDIMRQTRSLIE 541
            RD AK+   +  SQA+KIIMN+FYGVLGSSGCRFFD RLASSIT+RGH+IM QT+ LIE
Sbjct: 479 ARDEAKRNQEKAFSQAIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIE 538

Query: 542 AKGYQVIYGDTDSTFVWLKRPHSEDDANLIGHELVAYINDWWQQHLHQQHGLTSALEMEY 601
           A+GYQVIYGDTDSTFV L   +S+ +A+ IGH LV  IN WW +HL Q++ LTS LE+EY
Sbjct: 539 ARGYQVIYGDTDSTFVALGGQYSQQEADNIGHALVREINQWWTEHLKQEYALTSILELEY 598

Query: 602 ETHFHRFLMPTIRGAELGSKKRYAGMTITAQGEQQMVFKGLETVRSDWTPLAQQFQQQLY 661
           ETH+ RFLMPTIRG+E GSKKRYAG+      E Q++FKGLE+ R+DWTPLAQ+FQ QLY
Sbjct: 599 ETHYRRFLMPTIRGSETGSKKRYAGLKGDGDNE-QLIFKGLESARTDWTPLAQRFQHQLY 657

Query: 662 QRIFHRESYQEWVREYVAKTLNGEYDDLLVYRKRLRHKLSDYQRNVPPQVRAARMADDYN 721
           Q IFH +  + ++R  V +TL G+ DD LVY+KRLR +L +YQ+NVPPQVRAARMADD N
Sbjct: 658 QLIFHGQDPESYIRTIVEQTLAGQLDDQLVYQKRLRRRLHEYQKNVPPQVRAARMADDIN 717

Query: 722 RQHDRPLQYQSGGWISYVITVHGPEPLENRRSPLDYNHYVEKQLQPVADAILPFIHDDFA 781
            +  RPLQYQ  G I YVITV+GPEP E  +SP+DY HY++KQL+PVADAILPFI   F 
Sbjct: 718 AKLGRPLQYQYRGTIEYVITVNGPEPKEYSKSPIDYQHYIDKQLKPVADAILPFIGKQFD 777

Query: 782 TLITGQMGLF 791
            LI  Q+GLF
Sbjct: 778 ELIAPQLGLF 787