Pairwise Alignments

Query, 1834 a.a., DEAD/DEAH box helicase from Dickeya dianthicola 67-19

Subject, 1832 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  215 bits (547), Expect = 5e-59
 Identities = 200/654 (30%), Positives = 288/654 (44%), Gaps = 118/654 (18%)

Query: 20  LADNLKQYIEAQYHIRDEGLIEERRALLQQDGTIAQVPYIEATPVYKLGTPYSELP---- 75
           + D   +Y ++ + +RD+ +++ERR +L  DG +A+ P +EA P Y    P S+      
Sbjct: 17  IRDAYLRYYDSAFWMRDQAVMDERREILLADGVMAREPLLEAVPQYPSTDPISDACTQAK 76

Query: 76  ----IPKEASNVLTQLSEMGVGLYPRPYEHQSQALASFLGDEAS---DLVIATGTGSGKT 128
               + +  +NV+   S +      R  +HQ+Q+L +     A    ++V+ +GTGSGKT
Sbjct: 77  LDPFVAQHLANVIFGASNV------RLRKHQAQSLVTATAGNAEGHRNVVVTSGTGSGKT 130

Query: 129 ESFLMPIIGNLAIEAARRP---------------------------ESASLPGCRAILLY 161
           ESFL+P+I  L  E  R P                           + A  P  RA++LY
Sbjct: 131 ESFLLPLIATLMQERVRGPGAGEIHRWWRSDLANDAREWFHSRSGFDGAVQPAMRALVLY 190

Query: 162 PMNALVNDQLARIRRLFGDSEASKVLMAGRHSPVRFGGYTGRTPYPGRRSSKGDEQFIKP 221
           P NALV DQ++R+R+      AS+ L         FG YTG T                 
Sbjct: 191 PTNALVEDQVSRLRQ-----AASRALGLFGSPLFYFGRYTGAT----------------- 228

Query: 222 LFDEFYSKLADNAPVRAELERIGRWPSKDLEAFYGQDASRTRTYISGKKAGKQFVSNNWG 281
           L   F    +  +  R+ +  IGR   K        + +  R ++  +   ++ +     
Sbjct: 229 LGGTFIPPASLRSGDRSRINEIGREVLK-----IESEVAAIRKHMGSEGKDEKEIIETCS 283

Query: 282 ERLITQPGDRELMTRHEIQHRCPELLITNYSMLEYMLMRPIERNIFEQTRDWLRTDTRNE 341
           +     P   E++TR ++    P++LITN SML  MLMR  E  +F  TR+WL +D RN 
Sbjct: 284 Q--FQDPSIGEMLTRWDMIAAPPDILITNTSMLNIMLMRAEEGPLFANTREWLESDERNT 341

Query: 342 LILVLDEAHMYRGAGGAEVALLIRRLCARLDI-PRER-MRCILTSASLGSVTDGERFAQD 399
             LV+DE H YRG  G EVAL++R L  RL + P  R +RCI TSASL    DGE   + 
Sbjct: 342 FTLVVDELHSYRGTQGTEVALVVRNLLDRLGLDPNSRQLRCIATSASL----DGEAGKEY 397

Query: 400 LTGLSATSPRKFRIIEGTRESRPLAQAVTNNEAEALANFDLNS----FQRVADDLESAFA 455
           L        R F I  G      +   +    A  LA  DL +     +    ++  AF+
Sbjct: 398 LEQFFGVDRRSFSIYPGEPREFSVPLPIDRQLASTLAE-DLRAGGDRAKAAQGEISKAFS 456

Query: 456 ---AIDTLAAQIGWKKPTIKDHSTLRSWLFDNLTGFGPLEMLIEIVSGKAERLDVLSGKL 512
              AI T  A  G            RS + D  TG         +V   A  L  LS  L
Sbjct: 457 PREAIATACAVAG------------RSLVTDPTTG-----ERRNVVRPSA--LPALSEVL 497

Query: 513 FPDTPQEIAARATDALLALGCYAQRNSDNRVLIPT---RMHLFHRGLPGLYACIDPECNQ 569
           F D      + A + L AL   A+        IP    R H+F R + G++AC +PEC Q
Sbjct: 498 FGD------SNARNELTALLVAAKLEDRGTFEIPRPAFRSHMFLRQVQGMWACSNPECTQ 551

Query: 570 RLGN-HSGPTILGRLYTKPLAHCTCASKGRIYELLTHRDCGAAFIRGYVSSEMD 622
             G   S     GRL+  P   C C   G++ ELL   DCG AF+ GY+    D
Sbjct: 552 IEGRFKSSRRRFGRLFKSPAMKCGCG--GQVLELLYCYDCGEAFLGGYIVPTTD 603



 Score =  171 bits (432), Expect = 1e-45
 Identities = 178/671 (26%), Positives = 281/671 (41%), Gaps = 111/671 (16%)

Query: 1097 FQDVLIRDADRP----IDVLSCTTTMEVGVDIGSLVAVALRNVPPQRENYQQRAGRAGRR 1152
            F+     D + P    ID LS TTTMEVGVDIGSL  V + N+PPQR NYQQR GRAGR 
Sbjct: 1146 FKGTAYLDGESPLVQGIDALSVTTTMEVGVDIGSLKLVMMANMPPQRFNYQQRVGRAGRA 1205

Query: 1153 GASVSTVVTYSQNGPHDSYYFLNPEHIVAGSPRTPEVKVNNPKIARRHVHSFLVQTFFHE 1212
            G + S  VT S+   HD YYF NPE +    P  P++ ++ P+I RR V S  ++  F  
Sbjct: 1206 GQAFSYAVTISRGAAHDDYYFNNPERMTGDLPPQPKLDLSRPEIVRRVVASECLRRAFAS 1265

Query: 1213 LMEQGIYSPGETTSMLEKALGTTREFFHGAKDTGLNLDGFDSWVTNRVLSISGDLRTSVA 1272
            L      +PG   ++         +  HG                 R    +   R  +A
Sbjct: 1266 L------NPGPDRNV---------DSIHG--------------TFGRKAEWNPTYRAPIA 1296

Query: 1273 AWLPFALETGGLSLGDWFAKVAKEFLNTLHRLAENVPLPVIPVGEEDEGDDENISGVKFE 1332
             WL  + E   +          K+  N L   A +  +  I         D+ ++  +F 
Sbjct: 1297 VWLSSSPEVDEVVGRLLVHTPIKDRANDLASYARSGLVLAI---------DDAVANTRFI 1347

Query: 1333 QEELLEFLFHHGLLPSYAFPTSLCSFLIEEVARNSRGSSEVRTVQQPQQSISQALSEYAP 1392
            QEEL   L   G+LP + FPT + S   ++V       S +  V    + +  A+  + P
Sbjct: 1348 QEELSHLLAVAGILPMFGFPTQVRSLFHDKVR-----PSRLEEVVISDRPLDHAVWAFCP 1402

Query: 1393 GRLIVIDKKTYRSGG--VFSNALKGEINRARTLFDNPKKFIHCDN--CSFVRDPHNYQRD 1448
            G  I  DK+   + G  +  +  KG  N  + L   P  +  C++  CS +    + Q  
Sbjct: 1403 GSEIPKDKQLSTACGFVLRKDGPKGVHNDEQPL-GRPTMYTRCEDATCSTISAGEHTQ-- 1459

Query: 1449 NSICPICGGILKEEIMIQPEVFGAENARELNEDDREQEITYATVAQYPQPADPEDFEFKE 1508
               C  CGG+     + QP+ F A   R   + +R++  +       P  A  + +  + 
Sbjct: 1460 ---CATCGGLSVPFPLYQPKGFLAARRRRDYDGERQRGPSLPP----PVRAFEQGYGNEG 1512

Query: 1509 CGTHLLSTHATDQKLVTVNRGKNEGQSSGFSVCTECGAASVFDSYSSTKGPHKRPYKYIE 1568
            CG   ++       +V  NRG+                  +F+ +       + PY+ + 
Sbjct: 1513 CGPVKIAFRPGPVAIVNDNRGR------------------LFEFF-------QEPYERVS 1547

Query: 1569 SKD----TPHSCSGE------YKRVFLGHDFRTDLLLLRLTVASPLA-TDTSNVIVLRMY 1617
             +D      HS  G+        R  +G  F T++L   +  A  +      ++      
Sbjct: 1548 VRDPNLYRDHSPWGDGNAAPFLDRGAIGAVFTTEVLSFFIDGAPGIGRLGMLDIRKQPAA 1607

Query: 1618 EDALYSIAEALRLAASRHKQLDLDPAEFGSGFRILPTAGEDAQTLDLFLYDTLSGGAGYA 1677
              AL S AE ++LA +    LD+DP+EF  G +      +D +T  +F+ D+L  GAGYA
Sbjct: 1608 RAALASFAELVKLALA--TTLDIDPSEFRGGRQAF--RKDDCETEQVFIADSLENGAGYA 1663

Query: 1678 ---------EVAARNLEDILTATLEL-LEGCECDTSCTDCLNHFHNQHIQSRLDRKLGAS 1727
                     E A R   +++++  +      +CD SC DCL ++ N+     LD +L   
Sbjct: 1664 RWASDPVNLERAVRGYHEVVSSKWQAHSHAHDCDRSCPDCLRNYGNRFSHGILDWRLALD 1723

Query: 1728 LLRYAMYGEVP 1738
            L    +   +P
Sbjct: 1724 LADLMLGNPLP 1734