Pairwise Alignments

Query, 1049 a.a., ribonuclease E from Dickeya dianthicola 67-19

Subject, 920 a.a., ribonuclease, Rne/Rng family from Dechlorosoma suillum PS

 Score =  675 bits (1742), Expect = 0.0
 Identities = 438/1027 (42%), Positives = 579/1027 (56%), Gaps = 126/1027 (12%)

Query: 1    MKRMLINATQQEELRVALVDGQQLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY 60
            MKRML NATQ EELRVA+VDGQ+L DLDIES   EQ+K+NIYKG ITRIEPSLEA FV+Y
Sbjct: 1    MKRMLFNATQAEELRVAIVDGQKLIDLDIESAAKEQRKSNIYKGVITRIEPSLEACFVNY 60

Query: 61   GAERHGFLPLKEIAREYFPSSYNAHGRPNIKDVLREGQEVIVQVDKEERGNKGAALTTFI 120
            G ERHGFLP KE++R YF    +   R +IK+ L+EGQEVIVQV+K+ERGNKGAALTTF+
Sbjct: 61   GEERHGFLPFKEVSRSYFQPGVD--NRASIKEALKEGQEVIVQVEKDERGNKGAALTTFV 118

Query: 121  SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALGSLELPDGMGLIVRTAGVGKSADAL 180
            SLAG YLVLMPNNPR GG+SRR+EGD+R EL++ +  L++P GM LI RTA +G++A+ L
Sbjct: 119  SLAGRYLVLMPNNPRGGGVSRRVEGDERAELRDVMDQLQVPGGMSLIARTAAIGRNAEEL 178

Query: 181  QWDLAFRLKHWEAIKKAAEGRSAPFLIHQESNVIVRAFRDYLRPDIGEILIDNPKILELA 240
            QWDL + LK WEAI+ AA  +S PFLI+ E ++++RA RDY +PDIGEILID  +I E A
Sbjct: 179  QWDLNYLLKLWEAIEGAATSQSGPFLIYLEGSLVIRAIRDYFQPDIGEILIDTDEIFEQA 238

Query: 241  KEHIAALGRPDFGSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDTTEALT 300
            +  +  +  P   +++KLY  ++PLFS +QIE QIESA+ R+V LPSGG+IVID TEAL 
Sbjct: 239  RSFMGTV-MPANENRVKLYRDDVPLFSRFQIEHQIESAYSRQVNLPSGGAIVIDHTEALV 297

Query: 301  AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVE 360
            ++D+NS R+TRG DIEETA  TN EAADEIARQLRLRDLGGLIVIDFIDM   ++QREVE
Sbjct: 298  SVDVNSGRSTRGQDIEETALKTNQEAADEIARQLRLRDLGGLIVIDFIDMESQKNQREVE 357

Query: 361  NRLRDAVRQDRARIQIGRISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTIRDNESLS 420
            NRLRDA+R DRAR+Q+G+ISRFGL+E+SRQRL P+L E+S+  CPRC+GTG IR  ES +
Sbjct: 358  NRLRDALRHDRARVQMGKISRFGLMELSRQRLRPALAETSYIPCPRCTGTGHIRSTESAA 417

Query: 421  LSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKREAVNAIEKRQGDVRAIIVPHDGME 480
            L ILR++EEEA+K+NT  VH  VPV +A++LLNEKR  + AIE R   V  +++P+  +E
Sbjct: 418  LHILRILEEEAMKDNTAAVHTQVPVDVATFLLNEKRPDIQAIELRH-KVTILLIPNVHLE 476

Query: 481  TPHYSVLRVR----KGEEKQTLSYMLPQLLDVESQPSLEEQTPERRVPEQPALASFTMSD 536
            TP +++ R+R      E+ Q  SY + ++   E    L     E R P Q A     +  
Sbjct: 477  TPAHTIQRLRHDDLNNEDVQQPSYRMMEM-PAEEVKQLANAQSEARQPRQEA----AIKH 531

Query: 537  IPPAETKPAPVVTAPKAEKQPSSSERGLFGRFVGALKGIFAAPADVKEKPAETVEATSDE 596
            I P +  PAPVV A K    P +   G+ G+     +G             +TVE T + 
Sbjct: 532  ITPEQ--PAPVV-AEKPAAAPVAKSEGIIGKIFSWFRG------------NKTVEPTPEP 576

Query: 597  QEQKQERRNNRRQSGRRERPRDNREPRERDEQR---RNKRTQPQNADVETAPVAEAPAQD 653
                ++ R  R +   R   R     R R EQR   R +  + +N             Q 
Sbjct: 577  AATPRKGRGQRSEGQGRGEQRG----RGRGEQRGRGRGEGAEGRNGGERGERPTRGETQG 632

Query: 654  KAVRDEQRRE---QRAERQRRRQEEKRQAQDDVKELNAVTEAADTEDAVAEQEKPAQVMQ 710
               R++Q RE   QR +R  R  E     Q            AD E    + E+  +  +
Sbjct: 633  DNAREQQPREGRRQRGDRGDRNGERNNAVQ------------ADNERGEQQNEQRKERRE 680

Query: 711  RRQRRQLTQKVRVQDSDATGENTEAQLPAAPYVQQSVVEVPEPAALAAEVTNTENDAVES 770
            R+ RR+               N+E +       QQ+V    +     A  T  E  A + 
Sbjct: 681  RQPRRE--------------RNSEDK------AQQAVAAQADALNTQAAGTAPEQAAPQG 720

Query: 771  NRENGLPRRSRRSPRHLRVSGQRRRRYRDERYPAQSPMPMTQASASPEMASGKVWIRYPV 830
            + E G  RR RR+ R  R  G+RR+    E    Q+ +       +P +A+  V +  PV
Sbjct: 721  DEEGGRGRRGRRNNRRDR--GERRQENGAEGEVQQNAVTEVSQEQAPVIAAAVVEVANPV 778

Query: 831  AQQQQPERVEEPVSEFIDAPLSAAPELTAVAVATLPEAVDVLDTAPVSAPATPLSTPTQQ 890
                      EPV+        AA E  A  VA +  A +V   A   APA         
Sbjct: 779  ----------EPVAV-------AAVEAVAPTVAVVESAAEVAP-AVEEAPAA-------- 812

Query: 891  ETVPTEVPQHLDANVQEEIAQPQETQQLAPQFAETTALVEEAPAEV--VVADSDATTRSE 948
              V   +P+       EE+  P E +Q+ P        +   PAE+  VVA+ D    + 
Sbjct: 813  -AVEAAIPEAAPVVAVEEVVAPVE-EQVIPTPPRAVEPIAVPPAEIKPVVANIDQALEAS 870

Query: 949  PAETQPTEQPQVVHEPVLVENTPATQEPVAAVSAPAEISAVVPSQHYAAAPMTRAPAPAY 1008
                            V+VE +      V A        AVV ++     P    PAP  
Sbjct: 871  GL--------------VMVETSADKARQVQA--------AVVENE--VPRPRRTRPAPVV 906

Query: 1009 VPDAPRV 1015
            + D P V
Sbjct: 907  ISDEPLV 913