Pairwise Alignments

Query, 1049 a.a., ribonuclease E from Dickeya dianthicola 67-19

Subject, 491 a.a., ribonuclease, Rne/Rng family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  331 bits (848), Expect = 9e-95
 Identities = 198/476 (41%), Positives = 290/476 (60%), Gaps = 13/476 (2%)

Query: 3   RMLINATQQEELRVALVDG----QQLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFV 58
           RM I+    E++ VAL +      Q+ +  +E     + K NIY+G I  ++ +L+AAFV
Sbjct: 9   RMFISVLPGEQVEVALAEEGAKENQVKEYYVEMVHQAKTKGNIYRGIINNVDTNLQAAFV 68

Query: 59  DYGAERHGFLPLKEIAREYFPSSYNA-HGR--PNIKDVLREGQEVIVQVDKEERGNKGAA 115
           +YGA+++GFL + E+  EY+ + ++A  G+  P ++ VL+ GQEV+VQV KE  G+KGA 
Sbjct: 69  NYGADKNGFLQIDEVHPEYYNTPHDATKGKKYPLMQKVLKAGQEVLVQVVKEPTGSKGAF 128

Query: 116 LTTFISLAGSYLVLMPNNPRAGGISRRIEGDD-RTELKEALGSLELPDGMGLIVRTAGVG 174
           LTT++S+ G +LVL P   + G +SR++E D+ R  L+E L  L    G+G+IVRT   G
Sbjct: 129 LTTYLSMPGRFLVLTPGREQIG-VSRKVEDDEERGRLREMLEGLNPGPGLGVIVRTVSAG 187

Query: 175 KSADALQWDLAFRLKHWEAIKKAAEGRSAPFLIHQESNVIVRAFRDYLRPDIGEILIDNP 234
            S   LQ DL F  + W+ I+K     SAP LI++E ++  RA RDYL  D+ E+ +D+ 
Sbjct: 188 TSKTTLQRDLQFLKRLWKDIRKKGTEESAPCLIYKEPDLASRAVRDYLSDDVAEVWVDDE 247

Query: 235 KILELAKEHIAALGRPDFGSKIKLYTGEI-PLFSHYQIESQIESAFQREVRLPSGGSIVI 293
               L +E+ + L  P  GS +K+Y  +   L+  + I+ Q+E  + REV LPSGG +V 
Sbjct: 248 HTATLIEEYSSLLF-PRKGSLVKVYKDQTRTLWERFGIQRQLEQIYSREVTLPSGGRLVF 306

Query: 294 DTTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPV 353
           D TEAL AIDINS + +   + E  A  TN+EAA+ IA+QL+LRD+GG +VIDFI+M   
Sbjct: 307 DQTEALMAIDINSGKISGKTNFESMALRTNMEAAETIAQQLKLRDIGGQVVIDFIEMRDR 366

Query: 354 RHQREVENRLRDAVRQDRARIQIGRISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTI 413
            H REVE  LR+A++ DRAR  +G++SRFGLL++ RQR   S    +   CP C G+G  
Sbjct: 367 NHWREVEKILRNAMKNDRARHDVGKMSRFGLLQVVRQRTGSSALSITMEACPCCKGSGLR 426

Query: 414 RDNESLSLSILRLIEEE--ALKENTKEVHAIVPVPIASYLLNEKREAVNAIEKRQG 467
           R+ E  SL  LR I  +  AL   T          +A +LLN KRE +  +E++ G
Sbjct: 427 RNMEWQSLQALREIHRQLRALPHGTVTFLFETGAEVAMHLLNHKRERLLDLERQFG 482