Pairwise Alignments

Query, 482 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Dickeya dianthicola 67-19

Subject, 418 a.a., Fmu (Sun) domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 94.7 bits (234), Expect = 5e-24
 Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 23/275 (8%)

Query: 39  RRSIRVNTLKISVPDFLALVAPYGWELEAVPWCDEGFWLLNADEEAMRLGNALEHLAGLF 98
           +R +RVN LK +  D    +A  G E   VP       +++  + A+      +   GLF
Sbjct: 164 KRYLRVNPLKTNSEDLAKRLAKEGVETREVPGVPSALEVIS--DAALFRTECFKQ--GLF 219

Query: 99  YIQEASSMLPVSALLMGDASPARVLDMAAAPGSKTTQIAARLNNQGLIVANEYSASRVKV 158
             Q+A S    +A+  G     RV+D  A  G KT  IAA++  +G ++A +    ++  
Sbjct: 220 EQQDAGSQHVAAAV--GAEPGMRVIDACAGAGGKTLAIAAQMQGKGRLLAMDVEQWKLDN 277

Query: 159 LHANLHRCGVSNTALTHFDGRVFGNALPETFDAILLDAPCSGEGVVRKDPAAMSHWSLES 218
           L     R G  N              L  + D +LLD PCSG GV++++P A    + + 
Sbjct: 278 LKQRARRAGAHNVETRIIASSKTIKRLKLSADRVLLDVPCSGLGVLKRNPDAKWRDTPDR 337

Query: 219 IADIAATQRELILSAFHALKPGGVLIYSTCTLNHQENQHVCRWLMQQFPAACEVESLKDL 278
           +  +   QRE++ S    +K  G+LIY+TC++  QEN+       QQ  A         L
Sbjct: 338 LPVLVELQREILQSYSRMVKVDGILIYATCSIMPQENR-------QQVDAF--------L 382

Query: 279 FPQAHHALTEDGFLHVFPQIYDSEGFFVARLRKTA 313
               H +  +D  + V    +D  GF++AR+++TA
Sbjct: 383 AANPHFSFIDDETVSVADTGFD--GFYLARMKRTA 415