Pairwise Alignments

Query, 300 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola 67-19

Subject, 275 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  147 bits (371), Expect = 3e-40
 Identities = 83/278 (29%), Positives = 154/278 (55%), Gaps = 8/278 (2%)

Query: 23  RREKISASMRYIILLAVGILMLYPLAWMFSASFKPNHEIFTTLSLWPTHATWDGFINGWK 82
           +R++  +++  ++++A   +ML P+ W+F A+FK + +++  L L+ T  T + F  G  
Sbjct: 5   QRKQFWSAVHAVLIIAAMFVMLVPILWIFLAAFKSHVDVYQ-LKLFFT-PTLENF--GTV 60

Query: 83  TGTEYNFGHYMINTFKYVIPKVALTVISSTIVAYGFARFEIPWKNFWFATLIATMLLPST 142
               Y  G  + N+    +  V + +  +T+ AY F+RF +  +      ++AT  LP+ 
Sbjct: 61  FDDPYRLGEKLFNSTVVALVTVVIAIPIATLAAYSFSRFRLVGETAMLVVILATQFLPAV 120

Query: 143 VLLIPQYIMFREMGMLNSYLPLYVPVAFATQGFFVFMLIQFLRGVPRDMEEAAQIDGCNS 202
           V+++P +IMFR++G+L++ L L +        F ++M+  F+ G+P D EEAA +DG + 
Sbjct: 121 VIILPFFIMFRDIGLLDTRLGLILVNLAIVMPFAIWMIKGFIDGIPLDTEEAAMVDGSSR 180

Query: 203 WQVLWYVVVPILKPAIISVALFQFMWSMNDFIGPLIYV-YSVDKYPIALALKMSIDVTEG 261
            QV+W +V+P+  P +++  +F F+ + N+F+  LI         PI LAL       EG
Sbjct: 181 LQVIWNIVLPMAAPGLLTSGIFCFIIAWNEFLFALILTNKDAVTLPIGLAL---FKGEEG 237

Query: 262 APWNEILAMASISILPSIIIFFMAQRYFVQGVTSSGIK 299
             WN + A   I + P  ++  M ++YFVQG+T   ++
Sbjct: 238 DLWNLLSAAGIIIMAPMFVLALMIRKYFVQGMTMGAVR 275