Pairwise Alignments

Query, 300 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola 67-19

Subject, 282 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  124 bits (310), Expect = 3e-33
 Identities = 82/285 (28%), Positives = 147/285 (51%), Gaps = 11/285 (3%)

Query: 20  RTLRREKISASMRY--IILLAVGILMLYPLAWMFSASFKPNHEIFTTLSLWPTHATWDGF 77
           R + +   +A + Y  +I LA+ IL L PL  +   S KP  + F   + W   A + GF
Sbjct: 4   RPIEKAPRAAQLTYQGMIPLAL-ILWLLPLIAVAIFSVKPAGD-FAAGNYWGWPAEFAGF 61

Query: 78  INGWKTGTEYNFGHYMINTFKYVIPKVALTVISSTIVAYGFARFEIPWKNFWFATLIATM 137
            N  +  T+     Y++N+F   IP V   V  S +  +    +        F   IA  
Sbjct: 62  ENYARVFTDSEMPRYILNSFMITIPTVIGAVALSCMTGFALGIYRFRGNLLIFFMFIAGN 121

Query: 138 LLPSTVLLIPQYIMFREMGMLNSYLPLYV-PVAFATQGFFVFMLIQFLRGVPRDMEEAAQ 196
            +P  +L++P   +  +MG+ N+   L +  +AF T GF    +  F+R +P ++ EAA+
Sbjct: 122 FVPFQILMVPVRDLTVDMGLYNTKTGLVLFHIAFQT-GFCTLFMRNFIRALPYELIEAAR 180

Query: 197 IDGCNSWQVLWYVVVPILKPAI--ISVALFQFMWSMNDFIGPLIYVYSVDKYPIALALKM 254
           ++G   W++ W+VV+P++KPAI  +SV +F F+W  ND+   ++     +  P+   +  
Sbjct: 181 VEGVAEWRIFWFVVLPLMKPAIAALSVLIFTFIW--NDYFWAVVLTQGPNAQPVTAGI-T 237

Query: 255 SIDVTEGAPWNEILAMASISILPSIIIFFMAQRYFVQGVTSSGIK 299
           S +   G  +N + A + I+ LP +++FF+ Q++F+ G+T   +K
Sbjct: 238 SFNAQFGIAYNMLSAGSLIAALPPVMMFFLMQKHFIAGLTLGAVK 282