Pairwise Alignments

Query, 1227 a.a., exodeoxyribonuclease V subunit beta from Dickeya dianthicola 67-19

Subject, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

 Score =  760 bits (1962), Expect = 0.0
 Identities = 513/1253 (40%), Positives = 698/1253 (55%), Gaps = 100/1253 (7%)

Query: 3    AHSLPSPLDVLRFPLAGSRLIEASAGTGKTFTIAMLYVRLVLGHG-GEQAFSRPLNPPDI 61
            ++ L   LD LRFPL G+RLIEASAGTGKT+TIA LY+RLVLGHG  E   + PL+   I
Sbjct: 5    SNKLAVTLDTLRFPLHGARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQI 64

Query: 62   LVVTFTDAATRELRDRIRARLAQAAGYFQPDGKDDKEDEADPLLRALRADYPPEQWPACA 121
            LVVTFT+AAT ELRDRIR RL  A   F     DD      PLLR+L A++        A
Sbjct: 65   LVVTFTEAATAELRDRIRRRLHDARLAFARGASDD------PLLRSLLAEFTDHN---LA 115

Query: 122  RKLQLAAE-WMDEAAVSTIHGWCNRMLGEHAFDSGSLFNQTLETDQSDVLLEVVRDYWRT 180
              L L+AE  MDEAA+ TIHG+C RML ++AF+SGS F     TD+S +  +VV DYWR 
Sbjct: 116  VSLLLSAERQMDEAAIFTIHGFCQRMLTQNAFESGSRFENEFVTDESRLKAQVVADYWRR 175

Query: 181  FFFPLDARDVLELRDSWPSPEHFYRSVTPLLEYADEIGIDDLPAQIFSAVREEKTCRLAA 240
             F+PL      E+R  WP+P      +   L          L     +A+++ +  R+  
Sbjct: 176  QFYPLPISLASEVRRLWPAPSALLAEIAGYLSGPPVKLTTPLMEGDLAALQQAQIARICE 235

Query: 241  LKAPWPQWCGELRDVLNAAVAQKKADGRKLQARYFESWLDKLHLWATSDETTLDIGTGWT 300
            +K  W     E+   +  +   K +    L+       L  L  WA S+   L + +   
Sbjct: 236  IKQHWLVEREEIEPAVTGSDLHKNSQNALLRR------LPILDAWAQSETHDLHVPSELE 289

Query: 301  RLTPQGLRECWKVPEETPQHPALTAMEALQQQLSDLPEPRSHLLRHACRWVSRRFRHEQE 360
              T  GL    K  +  P  P L   E ++  L++    ++ LL HA           + 
Sbjct: 290  EFTQSGLLA--KSKKGNP--PQLALFERIEAFLAEPVSLKTPLLVHAIHHCRHWLAKAKS 345

Query: 361  SRAQMGFQDLLTRLDAALRGDNGERLAQRIRRQFPVAMIDEFQDTDPLQYRIFDTLYRVA 420
            +   + F DLLT+L AAL  D    L +RIR  +PVAMIDEFQDTDPLQY IF  LY   
Sbjct: 346  THHWLSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYL-- 403

Query: 421  DNDPQQGLILIGDPKQAIYAFRGADIYTYLRARRDTDGRHYTLGTNFRSTQAMVGAVNQV 480
             + PQ GL++IGDPKQAIYAFRGADI+TY++AR   +  HYTLGTN+RS+ AMV AVNQV
Sbjct: 404  -DYPQCGLLMIGDPKQAIYAFRGADIFTYIKARNQVNA-HYTLGTNWRSSAAMVAAVNQV 461

Query: 481  FMQAENRADGAGAFLFRQPDGGNPVPFLPVQAN-GRDEA-WILEGADAAALTCWTLAT-D 537
            F  A +       F++      + +PF PV A+ G D+  W LEG    ALT W     D
Sbjct: 462  FSSATH------PFIY-----SDDIPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLD 510

Query: 538  EPLSSAEYRQRMAAGCAREMVRLLQLGGQGRAGFAVPGQALRPVRPGDMAVLVNTGREAM 597
            +P S  +Y  +MA  CA ++  +L     G A F   G+A   +  GD+AVLV TG EA 
Sbjct: 511  KPQSKTDYYAQMAEACAAQIQHILTASASGAATFH-RGEA---IEAGDLAVLVRTGNEAR 566

Query: 598  AVRAQLSARGVRSVYLSDRESVFDSPQAGELHCWLAACADPENDRLLRAALGTPLLGLSW 657
             VR  LS +G+ SVYLS+R+SVF S  A ++   L A   PE++RLLRAA+ + L  L+ 
Sbjct: 567  MVRDALSQQGIASVYLSNRDSVFASDVAQDIERLLLAVWQPEDERLLRAAVASNLFALTA 626

Query: 658  QALDRLNHDEQEWERRVMQFVRYQSCWRQQGVLPMLRRLMWEFEVPRRLLA-ADNARALT 716
              LD LN+DE EWE+ + +F +Y+  W ++GVLPMLR ++ +  +  R LA ++  R LT
Sbjct: 627  SELDALNNDENEWEQLIAEFRQYRRLWSERGVLPMLRAVLTQRHIAERWLAESEGERWLT 686

Query: 717  DVLHLSELLQQASVHLDGEHALIRYLAEQCQADNP----GGDTLKLRLESDADLVKVVTV 772
            D LH+SELLQQA+  +D +  L+R+L  Q  AD      G D    RLES+  LV++VT+
Sbjct: 687  DYLHISELLQQATREIDSDQGLLRFLT-QAMADAAQGLGGSDEQIQRLESERRLVQIVTI 745

Query: 773  HKSKGLEYPLVFLPFACAFRAVNQRDVPLKYHDDDGQPR-LELTVSDEAVQRADHERLGE 831
            HKSKGLEYPLVFLPF  ++R  ++     KY+D +     ++LT ++EA+ +AD ERL E
Sbjct: 746  HKSKGLEYPLVFLPFVMSYRESSEG----KYYDAESATTWVDLTGNEEALAKADQERLAE 801

Query: 832  DLRKFYVALTRARYALWLGMAPLKD---------LEKSAPGYLLGAGEPLEPAQLAQPLS 882
            DLR  YVALTRA Y  ++G+APL++           +SA G+LL  G+    A L Q L 
Sbjct: 802  DLRLLYVALTRAVYGCFIGIAPLRNGNSSQEPTSAHRSAMGFLLQDGQEGGIADLQQALL 861

Query: 883  AWCGAHSQMA--PLPETDDEVYRA------ELNAPALGQEPPLPDMRRHRWRITSYSGLQ 934
              C     +   P P+  ++ Y+       EL A  L Q          RWR+TSYSGL 
Sbjct: 862  KQCENLPDVVQCPPPKRFEQAYQPPQLDERELTARELSQAID------RRWRVTSYSGLV 915

Query: 935  L-APEGHYREFREPSAGDVP--EVQSAQQETFSEPQASVERLPPLPAGLDMYSFPRGAAP 991
            + +    +   +E    +V   ++ SAQ+   +  + SVER         +++FPRGA P
Sbjct: 916  MQSSHARHDPLQELPLLEVGGFDLDSAQERDGAALE-SVER--------SIFNFPRGARP 966

Query: 992  GSFLHGLLEWAGKEGFAALAAERPRVEDQVARRCNRQGWTQWIPMLTDWLMALLSQPLAL 1051
            G+FLH L E   +  F   A   P  +  +    + Q  ++W+P+L   +  +LS PL  
Sbjct: 967  GTFLHSLFE---EVDFQQSAHSEPNTKIILELMESEQIESEWLPVLQQLVDTVLSTPL-- 1021

Query: 1052 PTSPGSAVSLAGLTQYQ--VEMEFWFALNQVDTQVLDQQVRAATLAGEPRAALMREQLNG 1109
                G A+ L  +   Q   E+EF   +  +D   L++  +           L    + G
Sbjct: 1022 ---DGKALRLQQIMAAQRLTELEFLLPIEVLDAPTLNRITQRHDPLSAHAGDLGFHAVQG 1078

Query: 1110 MLKGFIDLVFEHQGRYYVLDYKSNWLGADVADYDPARMAHAMLDHRYDLQLALYLFALHR 1169
            MLKGFIDLVF++QGRYYVLD+KSN LG D A Y P R+  AM +HRYDLQ  +Y  ALHR
Sbjct: 1079 MLKGFIDLVFQYQGRYYVLDWKSNHLGDDPAAYHPQRLGSAMAEHRYDLQYQIYALALHR 1138

Query: 1170 LLKSRLPDYDYDRHVGGALYLFLRGSQAPGG-GVFAQRPDRALIEALDRLFSG 1221
             L+SRL  Y+Y++H GG  YLFLRG    G  GVF  +P  AL++ LD L +G
Sbjct: 1139 FLRSRLAHYNYEQHFGGVFYLFLRGMDGRGDQGVFHTKPSLALLDELDGLIAG 1191