Pairwise Alignments

Query, 1227 a.a., exodeoxyribonuclease V subunit beta from Dickeya dianthicola 67-19

Subject, 1189 a.a., ATP-dependent nuclease/helicase from Sinorhizobium meliloti 1021

 Score =  120 bits (301), Expect = 7e-31
 Identities = 228/917 (24%), Positives = 352/917 (38%), Gaps = 148/917 (16%)

Query: 18  AGSRLIEASAGTGKTFTIAMLYVRLVLGHGGEQAFSRPLNPPDILVVTFTDAATRELRDR 77
           A S  + A+AG+GKT  +    +RL+L             P  IL +T+T AA  E+ +R
Sbjct: 31  ACSAWVSANAGSGKTHVLTQRVIRLLLAG---------CRPSAILCLTYTKAAASEMSNR 81

Query: 78  IRARLAQAAGYFQPDGKDDKEDEADPLLRALRADYPPEQWPACARKL-QLAAEWMDEAAV 136
           +  +LA+ A           +   +  + A+    PP      AR+L   A E      +
Sbjct: 82  VFEKLAEWATL--------DDTTLEKRIEAIEGKRPPTAKIQEARRLFARALETPGGLKI 133

Query: 137 STIHGWCNRMLGEHAFDSGSLFNQTLETDQSDVLLEVVRDYWRTFFFPLDARDVLELRDS 196
            TIH +C  +L +   ++    + ++  D++  +L              DAR  L    +
Sbjct: 134 QTIHAFCEALLHQFPLEANVAGHFSVLDDRAAAVLLA------------DARRALLTATA 181

Query: 197 WPSPEHFYRSVTPLLEYADEIGIDDL---------PAQIFSAVREEKTCRLAALKAPWPQ 247
             S      +   +L+ AD+ G++ L         P Q F      +    A L+A    
Sbjct: 182 AASDGELAEAFATVLDLADDTGLEKLLAAIVANRAPIQAFLDHASGRGGMEAHLRAALGL 241

Query: 248 WCGELRDVLNAAVAQKKADGRKLQARYFESWL-----------DKLHLWATSDETTLDIG 296
             GE    + AAV             Y +  L           D L      D    D  
Sbjct: 242 EPGETAGTVMAAVWPLAGLNGPALDDYIDLGLRLGGAKPSAIADGLRAVRAID----DAA 297

Query: 297 TGWTRLTPQGLRECWKVPEETPQHPALTAMEALQQQLSDLPEPRSHLLRHACRW------ 350
           T +++L         K   E+    A     A Q +L  + E RSH+L    R       
Sbjct: 298 TRYSKLVELFFNGGGKPKAESAFLNAAMRRAAPQLELR-VEEARSHMLACVDRLSIVQMY 356

Query: 351 ------------VSRRFRHEQESRAQMGFQDLLTRLDAAL-RGDNGERLAQRIRRQFPVA 397
                       ++R +   +++R+Q+ F+DL+ R  A L R D G  +  ++ +     
Sbjct: 357 GATRAALVLAERLNRDYEALKKARSQLDFEDLIHRTAALLARSDVGAWVHYKLDQGIDHI 416

Query: 398 MIDEFQDTDPLQYRIFDTLYRVAD-------NDPQQGLILIGDPKQAIYAFRGADIYTYL 450
           ++DE QDT P Q+ I  +L   AD           + +  +GD KQ+IY+F+GA    + 
Sbjct: 417 LVDEAQDTSPAQWTIIQSL--AADFFAGETARADDRTIFAVGDEKQSIYSFQGARPERFS 474

Query: 451 RARRDTDGR------HYT---LGTNFRSTQAMVGAVNQVFMQAENRADGAGAFLFRQPDG 501
           R    T+ R      H++   L  +FRST  ++ AV+ VF    N A G  A        
Sbjct: 475 RESTLTERRVRAGNKHFSPIRLQLSFRSTVDVLSAVDTVFANPGN-ARGLSARSEAIVHA 533

Query: 502 GNPVPFLPVQANGRDEAW-ILEGADAAALTCWTLATDEPLSSAEYRQRMAAGCAREMVRL 560
            N +        G  + W ++    AA+   WT   D     A          AR +  +
Sbjct: 534 SNRIG-----QPGAVDLWDVIAPEPAASEEDWTAPFDATPERAPVNI-----LARRIAAV 583

Query: 561 LQLGGQGRAGFAVPGQALRPVRPGDMAVLVNTGREAM--AVRAQLSARGVRSVYLSDRES 618
           L+    GR      G   R +RPGD+ VLV   R+A   A+   L  RG   V  +DR  
Sbjct: 584 LE-DWIGRETVIEKG-VRRAMRPGDVIVLVRK-RDAFVNALTRALKRRGNIPVAGADRLV 640

Query: 619 VFDSPQAGELHCWLAACADPENDRLLRAALGTPLLGLS----WQALDRLNHDEQEWERR- 673
           +       +L         PE+D  L A L +PLL L     ++   R    E  W R  
Sbjct: 641 LTSHIAVQDLIALGRFVLLPEDDLSLAALLKSPLLDLGEEDVFELAARRTEGESLWRRLR 700

Query: 674 ---VMQFVRYQSCWRQQGVLPMLRRLMWEFEVPRRLLAADNARA---------LTDVLH- 720
                +  RY    R       L R +   +   R+L AD  R          ++D+L  
Sbjct: 701 QAGAEETSRYHEAVRTLSRYSGLARELLPHDFYARVLGADGGRRAFLARLGSEVSDILDE 760

Query: 721 -LSELLQQASVHLDGEHALIRYLAEQCQADNPGGDTLKLRLESDADLVKVVTVHKSKGLE 779
            L+  L      L G  A I  L  +         T+K   + + D V+V+TVH +KGLE
Sbjct: 761 FLTFALDHERNGLPGLQAFISTLEIEAP-------TVKREQDKERDEVRVMTVHAAKGLE 813

Query: 780 YPLVFLPFACAFRAVNQRDVPLKYHDDDGQPRLELTV--------SDEAVQRADHERL-- 829
            P+VFL        V Q+   L++ +        LTV        +  ++  AD+ERL  
Sbjct: 814 APVVFLVDGGGEAFVRQQVSDLRFLEKAQVDHSTLTVPVWRAPGSAPNSLIAADNERLKK 873

Query: 830 ---GEDLRKFYVALTRA 843
               E  R  YV +TRA
Sbjct: 874 LAEEEYRRLLYVGMTRA 890