Pairwise Alignments

Query, 1227 a.a., exodeoxyribonuclease V subunit beta from Dickeya dianthicola 67-19

Subject, 1187 a.a., UvrD/REP helicase (NCBI) from Rhodospirillum rubrum S1H

 Score =  107 bits (268), Expect = 5e-27
 Identities = 239/940 (25%), Positives = 362/940 (38%), Gaps = 167/940 (17%)

Query: 16  PLAGSRLIEASAGTGKTFTIAMLYVRLVLGHGGEQAFSRPLNPPDILVVTFTDAATRELR 75
           PLA S  + ASAGTGKT  +    +RL+L             P  +L +TFT AA  E+ 
Sbjct: 30  PLA-SAWVAASAGTGKTKVLTDRVLRLLLA---------GTPPQRLLCLTFTKAAAAEMA 79

Query: 76  DRIRARLAQAAGYFQPDGKDDKEDEADPLLRALRADYPPEQWPACA---RKLQLAAEWMD 132
           +R+ A LA  A           E+     L +L    P  +    A   R  +L A+ +D
Sbjct: 80  NRVSAVLAGWATL--------PEEALRGRLASLLGSLPEGEEAIEALSGRARRLFAQVLD 131

Query: 133 ---EAAVSTIHGWCNRMLGEHAFDSG-SLFNQTLETDQSDVLLEVVRDYWRTFFFPLDAR 188
                 + TIHG+C  +L     ++G +   + L+  ++  L +  RD           R
Sbjct: 132 CPGGLRIQTIHGFCQTLLRRFPLEAGVAPHFEVLDDREAQALHQSARD--------AVLR 183

Query: 189 DVLELRDSWPSPEHFYRSVTPLLEYADEIGIDDLPA--------------------QIFS 228
              +  D          ++  +  +  E   D++ A                     +  
Sbjct: 184 AARQAEDGEGGDPALAAALAVVTGHLSESRFDEVMAALGGQRGRLLAALDHFGGAEALGK 243

Query: 229 AVREEKTCRLAALKAP---WPQWCGELR---DVLNAAVAQKKADGRKLQARYFESWLDKL 282
           A+R+  +  LAA   P       C E       L AA A   A G+  Q R       ++
Sbjct: 244 AIRD--SLGLAADDTPETVLADGCAEGAFDGPSLRAAAAALIAGGKTDQERGL-----RI 296

Query: 283 HLWATSDETTLDIGTGW-------TRLTPQGLRECWKVPEETPQHPALTAMEALQQQLSD 335
             + +  +  +  G  W       T+   + ++     P E      L ++EA QQ++  
Sbjct: 297 AAFVSETDPAIREGLFWTYIGAFLTKTDEKPVKTLCTKPVEKAHPGTLESLEAEQQRIWT 356

Query: 336 LPE--------PRSHLLRHACRWVSRRFRHEQESRAQMGFQDLLTRLDAALRGDNGER-L 386
           L E          S  L      + + ++  + +  +M ++DL+      L GD     +
Sbjct: 357 LRERLRAATTAQASEALLTLVGAMLKDYQRRKRALGRMDYEDLILAARRLLAGDGAAAWV 416

Query: 387 AQRIRRQFPVAMIDEFQDTDPLQYRI-------FDTLYRVADNDPQQGLILIGDPKQAIY 439
             ++       ++DE QDT P Q+ I       F T     D    + +  +GD KQ+IY
Sbjct: 417 LFKLDGGLDHLLVDEAQDTSPDQWAIASALAGEFFTDSARWDGTRPRTVFAVGDRKQSIY 476

Query: 440 AFRGADIYTYLRARR------DTDGRHYT---LGTNFRSTQAMVGAVNQVFMQAENRADG 490
            F+GAD   +   RR         G H+    L  +FRST+A++ AVN VF +   R DG
Sbjct: 477 GFQGADPKAFEDMRRHFHDAVSDIGGHFAEVPLNISFRSTRAVLEAVNAVFARQPAR-DG 535

Query: 491 AGAFLFRQPDGGNPVP------FLPVQANGRDEAW-ILEGADAAALTCWTLATDEPLSSA 543
                  Q D  + V            A G  E W  +E A       W     E +   
Sbjct: 536 VA-----QDDADSGVAEDITHHAFRKDAGGLVELWPAMEPAPRVVGDPWKPPV-ERIGLE 589

Query: 544 EYRQRMAAGCAREMVRLLQLGGQGRAGFAVPGQALRPVRPGDMAVLVNT--GREAMAVRA 601
             R R+A   A + ++ +  GG+      +  Q  RP+RPGD+ VLV    G E   V A
Sbjct: 590 SARARLAKRVA-QRIKTMTSGGE-----LLESQG-RPIRPGDILVLVRRRGGFEEELVSA 642

Query: 602 QLSAR----GVRSVYLSDRESVFDSPQAGELHCWLAACADPENDRLLRAALGTPLLGLSW 657
             SA+    GV  + L+D+ +V D    G+      A   PE+D  L + L  PL+GL  
Sbjct: 643 LKSAKVEVAGVDRMTLTDQLAVMDLIALGK------ALLLPEDDLTLASVLKGPLIGLDE 696

Query: 658 QALDRL----NHDEQEWERRVMQFVRYQSCWRQQGVLPMLR----RLM-WEFEV------ 702
            AL  L      DE+ W+R         +  +   ++  LR    RL   EF        
Sbjct: 697 DALFTLARDRGRDERLWDRLRPHAGAENAYGKAMEIIEPLRDRAGRLAPHEFYAHVLDGP 756

Query: 703 --PRRLLAADNARALTDVLHLSELLQQASVH-LDGEHALIRYLAEQCQADNPGGDTLKLR 759
              RRLL         D   + E L     H   G  AL  +L+        G   +K  
Sbjct: 757 LNGRRLLLGRLGPEAED--PIDEFLALTLAHERVGPPALQGFLSWL----EKGTVEIKRD 810

Query: 760 LESDA-DLVKVVTVHKSKGLEYPLVFLPFACAFRAVNQRDVPLKYHDDDGQPRLELTVSD 818
           L+  A D V+++TVH SKGL+ P+VFLP   A    N  D+ L   D      L      
Sbjct: 811 LDQGALDAVRIMTVHGSKGLQAPVVFLPDTLAKPTGN--DLLLWTADKGVADALPFWCPS 868

Query: 819 EA---------VQRADHERLGEDLRKFYVALTRARYALWL 849
           +A         +     ER  E  R  YVA+TRA   L++
Sbjct: 869 KADRGAAIEAMIDALKVERDREYRRLLYVAMTRAADRLYI 908