Pairwise Alignments

Query, 681 a.a., exodeoxyribonuclease V subunit alpha from Dickeya dianthicola 67-19

Subject, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

 Score =  390 bits (1003), Expect = e-113
 Identities = 280/724 (38%), Positives = 365/724 (50%), Gaps = 105/724 (14%)

Query: 20  GWLRELDRALVRFLHQECPDA------PPLLLLGAALVSYQLGRGHVCLDLAATLADSGF 73
           G LR LD    RF+ ++   A        LL + +A +S +LGRGH+CL L     +   
Sbjct: 16  GALRPLDVQFARFIGKQAVLAGHNAAESELLSVLSAALSAELGRGHICLPLCDAQGNRCD 75

Query: 74  SLALPPEGDRSENRKIARPAAVLAGVTLSAWQAALQQPQLVSSGEGSTPLVLVGARLYLR 133
             AL      +  +   R  AV        WQA LQ   LV     + PL+  G+RLYL 
Sbjct: 76  LAALIGLYGEASLQHSERWLAV-------DWQALLQASPLVGQQGEAVPLMFDGSRLYLH 128

Query: 134 RYWRYEQDVRHAITQ-------------------------------QLTQNHALRAAIAP 162
           RYW YE+ +   +T+                               Q  Q   L +    
Sbjct: 129 RYWHYEKQLAARLTELAAPQRLSPAELANLRERLNTLFARDYLGLWQALQQKPLSSVERI 188

Query: 163 AVLRQRLDALFPTAAAGPA---------------------------NWQKLACALAAGSA 195
            +L  RLD +   A   PA                           NWQK+A A+A    
Sbjct: 189 QLLNDRLDVVESDALDWPAIEAVVEKAQRAADLQALEQLIPLTHCLNWQKVAAAVALTRR 248

Query: 196 FSIITGGPGTGKTTTVVKLLALLQSLALEQHGKPLRIRLAAPTGKAAARLNESIAGAIAG 255
           F++I+GGPGTGKTTTV KLLA L S ++ Q GK   I+L APTGKAAARL ES+  A++ 
Sbjct: 249 FAVISGGPGTGKTTTVTKLLAALISQSMAQ-GKVPEIKLIAPTGKAAARLTESMGKAVSQ 307

Query: 256 LMLDGLAQGEAIREHINSEVVTLHRLLGSRPDTRHFRHHADNPLMLDVLVVDEASMVDLE 315
           L ++       I   I S   T+HRLLG+ P +  FRHH  NPL LD+LVVDEASMVDL 
Sbjct: 308 LAIE-----PEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPLHLDLLVVDEASMVDLP 362

Query: 316 MMAALLAAMPARSRLILLGDKDQLASVEAGALMGELCQRAAQGHYLPQTRDWLREVAGDA 375
           +M  L+ A+P  +RLILLGDKDQLASVEAGA++G++C    QG+   Q    L E+ G A
Sbjct: 363 LMVKLVEALPKHARLILLGDKDQLASVEAGAVLGDICTFLNQGYGHEQGAQ-LAELTGFA 421

Query: 376 PDDALLDPHGSALDQSIAMLRHSYRFGADSGIGQLAEAVNAGDAAALAAVWQHGYADLAR 435
                     + +   + ML+ SYRF A SGIGQLA+A+N+G  A + AVWQ  ++D+  
Sbjct: 422 TLRQTASKTVNPVADCLCMLQKSYRFDARSGIGQLAKAINSGSPARVEAVWQQSFSDIEH 481

Query: 436 LTLTANDNRALREWVIDGAVDRFACQPHAAPPVGYGDYLRRMASTRPALTAAQSEFDVWA 495
             L+    + L + ++                  Y  YL  +        + Q      A
Sbjct: 482 FALSGEHYQQLLQTLVQ----------------AYRPYLSLLNQPTEQFESTQQSMLTLA 525

Query: 496 AQILDAFGQFQLLCALRNGPWGVDSMNERIAHLLYRDGLLAAWQG-WYPGRPVMVTRNDY 554
              LDAF + +LLCALR G +GV  +N RI   L    L+   +  WY GRP+MVTRND+
Sbjct: 526 KSALDAFSRCRLLCALREGDFGVMGLNTRIERALNAHKLIKTQEEIWYHGRPIMVTRNDH 585

Query: 555 SQRLMNGDIGITLPVPLLQPDGSRAWVTRVAFPAGDGSSGIRWVLPGRLSAVETVFAMTV 614
              L NGDIG+ +       D  R    +V F   DGS  I+ VLP R+   ET +AMT+
Sbjct: 586 GLGLYNGDIGLCMRD--RDDDQGR---LKVYFELPDGS--IKAVLPSRVPQHETAYAMTI 638

Query: 615 HKSQGSEFAHTALLLPDCLSPILTRELVYTGITRAKHAFSLGCVGEHSTVLAEAVGRRVL 674
           HKSQGSEF  T L+LP   SPILTRELVYTGITRAK    L C    + VL  A+  +  
Sbjct: 639 HKSQGSEFDLTLLILPPDYSPILTRELVYTGITRAKKQLKLYC---DNKVLQRAIKVKTQ 695

Query: 675 RVSG 678
           R SG
Sbjct: 696 RASG 699