Pairwise Alignments

Query, 183 a.a., sigma-70 family RNA polymerase sigma factor from Dickeya dianthicola 67-19

Subject, 167 a.a., RNA polymerase ECF-type sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 77.0 bits (188), Expect = 2e-19
 Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 9/160 (5%)

Query: 19  RQQLAAHLTRLWRYGLVLSRSHDAAEELVQSTCVRALEKSAQFTPGTRIDRWLFSILHSI 78
           R+ L      L R+   L+   + A +L+Q T ++AL+   ++ P T    W+++I+ +I
Sbjct: 7   RKDLVGVQDELLRFAYKLTTDREEANDLLQETSLKALDNEDKYMPDTNFKGWMYTIMRNI 66

Query: 79  WISDLRARRVRMGQGFV-ESDEL----LAPDTHALNDDRRHYQKIMQR-VNALPEAQRNA 132
           +I++   R+V   Q F+ ++D L    L  DT   + +R +  K M R VNALP+  R  
Sbjct: 67  FINNY--RKVVRDQTFIDQTDNLYHLNLPQDTGFESTERTYDLKEMHRVVNALPKEYR-V 123

Query: 133 IFLVYVEGFTYQEAADTLSVPIGTIMSRLAAARTILAQSV 172
            F ++V GF Y+E A+ L++P+GT+ SR+   R  L + +
Sbjct: 124 PFAMHVSGFKYREIAEKLNLPLGTVKSRIFFTRQKLQEEL 163