Pairwise Alignments

Query, 183 a.a., sigma-70 family RNA polymerase sigma factor from Dickeya dianthicola 67-19

Subject, 167 a.a., RNA polymerase ECF-type sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 66.2 bits (160), Expect = 3e-16
 Identities = 46/166 (27%), Positives = 88/166 (53%), Gaps = 23/166 (13%)

Query: 20  QQLAAHLTRLWRYGLVLSRSHDAAEELVQSTCVRALEKSAQFTPGTRIDRWLFSILHSIW 79
           Q + A  + L R+   L+   D+A +LVQ   ++AL+   +FT    +  W+F+I+ +I+
Sbjct: 8   QGILAMESDLHRFAYKLTSDRDSANDLVQDCVLQALDNHEKFTHAKNLKGWMFTIMRNIF 67

Query: 80  ISDLRARRVRMGQGFVESDELLAPDTHALND---------DRRHY----QKIMQRVNALP 126
           +++ R R VR        +  L  DT+++N          DR  +    +++ + ++++P
Sbjct: 68  VNNYR-RTVR--------EMNLIDDTYSINQQSLIEDEEGDRFEFAYDMKQLYRVIHSIP 118

Query: 127 EAQRNAIFLVYVEGFTYQEAADTLSVPIGTIMSRLAAARTILAQSV 172
           E  +   F ++V GF Y+E A+ L +P+GT+ SRL   R  L + +
Sbjct: 119 EDMK-VPFQMFVAGFKYREIAEKLGLPMGTVKSRLFFIRKRLKEEL 163