Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Dickeya dianthicola 67-19

Subject, 343 a.a., Holliday junction DNA helicase ruvB (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  377 bits (969), Expect = e-109
 Identities = 187/310 (60%), Positives = 240/310 (77%)

Query: 20  DRAIRPKLLSEYVGQPVVREQMEIFIEAARRRGDALDHLLIFGPPGLGKTTLANIVANEM 79
           + A+RP    ++ GQ  V E + IF++AAR RG+ALDH+L+ GPPGLGKTTL+NI+ANE+
Sbjct: 21  ENALRPLSFEDFSGQDKVVENLRIFVKAARLRGEALDHVLLHGPPGLGKTTLSNIIANEL 80

Query: 80  GVNLRTTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMI 139
           GV  + TSGPVL+K GDLA +LT+LEP+DVLFIDEIHRLSPVVEE LY AMEDY++DIMI
Sbjct: 81  GVGFKVTSGPVLDKPGDLAGVLTSLEPNDVLFIDEIHRLSPVVEEYLYSAMEDYRIDIMI 140

Query: 140 GEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEFYQVADLQHIVRRSAQC 199
            +GP+ARSI++DL PFTL+GATTR+G LT+PLR RFGI   LE+Y    L +I+RRSA  
Sbjct: 141 DKGPSARSIQIDLNPFTLVGATTRSGLLTAPLRARFGINLHLEYYDDDILSNIIRRSASI 200

Query: 200 LGLDMTDDGALEVARRSRGTPRIANRLLRRVRDFSEVKSDGAISAVVAVQALDMLAVDSE 259
           L +  +   A E+A RSRGTPRIAN LLRRVRDF++VK  G+I   +A  AL+ L +D  
Sbjct: 201 LDVPCSVRAASEIASRSRGTPRIANALLRRVRDFAQVKGSGSIDTEIAQFALEALNIDKY 260

Query: 260 GFDYMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRI 319
           G D +D K+L  +IDKF GGPVGL  +A A+GE+  TIE+V EP+LI++GF++RTPRGR 
Sbjct: 261 GLDEIDNKILCTIIDKFKGGPVGLTTIATALGEDAGTIEEVYEPFLIKEGFMKRTPRGRE 320

Query: 320 ATQHAYRHFG 329
            T+ AY+H G
Sbjct: 321 VTELAYKHLG 330