Pairwise Alignments

Query, 382 a.a., MFS transporter from Dickeya dianthicola 67-19

Subject, 474 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  149 bits (375), Expect = 2e-40
 Identities = 105/368 (28%), Positives = 183/368 (49%), Gaps = 9/368 (2%)

Query: 1   MSTYTRPVLLLLCGLLLLTVCLAVLNTLVPLWLNDRQLPVWQVGVVGSAYFSGNLLGTLV 60
           M+   R    L    LL  +   +L T + L L+   +P   +G + SAY+ G + G+ +
Sbjct: 1   MANQLRTFASLYSTTLLTVLAGGLLTTYLGLRLSVIHVPQLWIGGMMSAYYVGLVAGSKI 60

Query: 61  AGGLIRIYGFNRSYYLAALMFGLATAALALSPDIGSWILWRFVAGVACALIWVVVESALL 120
              LI   G  R++  +A +        AL   +  W+L R + G+     ++V+ES L 
Sbjct: 61  GHRLIAQVGHIRAFVASAGIVAACALGHALVDQLAVWLLLRLIVGMGMMCQYMVLESWLN 120

Query: 121 CSGNALNRGQLLAAYMMAYYLGSVVGQLLLGMVSTALFSILPWLVTLALLAVLPL-LFAR 179
               +  RG + A+YM+  Y G ++GQ  + +        L  +     L ++P+ L  R
Sbjct: 121 EQAESSQRGTVFASYMIVSYFGLILGQGAISLYPELGLEPLLLIAICFALCIVPISLTRR 180

Query: 180 IPPPQPVTQRVNVWRMLRYRTARLGIQGCVISGIILGSLYGLMPLYLAHQGMSDARVGYW 239
           I P   V   + +     ++ A   +    I  +I+GS YGL P Y ++ G+   +V  +
Sbjct: 181 IHPAPLVPAPLKIAHY--WQKAPQALTTIAIGSMIVGSFYGLAPAYASNLGLPPEKVATY 238

Query: 240 MALLISAGIFGQWPVGRMADRYGRLLVLRVLVFAVILGSLAI-LAPGRYSMAPSL---FL 295
           M   I AG+  QWP+G+++D   R  ++R  +  V+LG LA+ +A   Y    SL   FL
Sbjct: 239 MTATILAGLLAQWPMGKLSDIMSRSRLIR--INCVLLGILALGIALTPYHPTVSLVMTFL 296

Query: 296 LGAAGFTLYPVAMSWACEKVAPSELVAMNQALLLSYTIGSLCGPSLAAMLMQTYSDQLLF 355
            G  GFT YP+A + A  +V  SE V ++  +LL++ +G+  GP +A+ LMQ + + +L+
Sbjct: 297 FGILGFTFYPLATALANSRVEQSERVGLSATILLTFGMGASIGPLIASTLMQWFGNSMLY 356

Query: 356 VLIAAVSL 363
             ++A ++
Sbjct: 357 GFMSACTV 364