Pairwise Alignments

Query, 382 a.a., MFS transporter from Dickeya dianthicola 67-19

Subject, 387 a.a., major facilitator family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  158 bits (399), Expect = 3e-43
 Identities = 103/334 (30%), Positives = 170/334 (50%), Gaps = 5/334 (1%)

Query: 12  LCGLLLLTVCLAVLNTLVPLWLNDRQLPVWQVGVVGSAYFSGNLLGTLVAGGLIRIYGFN 71
           + GL L  +    L +L+PL L    L +     + S ++ G LLG      ++   G +
Sbjct: 16  VAGLSLFALASGYLMSLIPLSLTYFDLSLDLAPWLASIFYLGLLLGAPCIAPIVSRIGHS 75

Query: 72  RSYYLAALMFGLATAALALSPDIGSWILWRFVAGVACALIWVVVESALLCSGNALNRGQL 131
           +++ L   +   +   + L P    W+  R +AG+A A I+VVVES LL +     R + 
Sbjct: 76  KAFILFLNILLCSVVVMVLLPQTSIWLASRLIAGLAVAGIFVVVESWLLMADTQKQRAKR 135

Query: 132 LAAYMMAYYLGSVVGQLLLGMVSTALFSILPWLVTLALLAV--LPLLFARIPPPQPVTQR 189
           L  YM A Y G+ +GQL +  + T     LP+LV + LLA   LP L  +   PQ   Q 
Sbjct: 136 LGLYMTALYGGTAIGQLAVDYLGTT--GNLPYLVVIGLLAAASLPALLVKRGQPQSSEQH 193

Query: 190 VNVWRMLRYRTARLGIQGCVISGIILGSLYGLMPLYLAHQGMSDARVGYWMALLISAGIF 249
                 L+   ++  I GC++SG++LG +YGL+P+Y++       + G +MAL+I  G+ 
Sbjct: 194 SIALSDLK-TLSKPAIAGCLVSGLLLGPIYGLLPIYVSQDMGFAQQTGQFMALIILGGMI 252

Query: 250 GQWPVGRMADRYGRLLVLRVLVFAVILGSLAILAPGRYSMAPSLFLLGAAGFTLYPVAMS 309
            Q  V  ++ R  + +++           L ++      +     LLGA  F LYP+A+S
Sbjct: 253 VQPLVSYLSPRIQKSVLMIAFCLVGAAALLLLMQTSLVGLWLGFVLLGACAFALYPIAIS 312

Query: 310 WACEKVAPSELVAMNQALLLSYTIGSLCGPSLAA 343
            AC+ +  S++V+  Q +LLSY++GS+ GP  A+
Sbjct: 313 LACDHLPSSQIVSATQIMLLSYSVGSVIGPVAAS 346