Pairwise Alignments

Query, 244 a.a., response regulator transcription factor from Dickeya dianthicola 67-19

Subject, 228 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  109 bits (272), Expect = 5e-29
 Identities = 69/238 (28%), Positives = 124/238 (52%), Gaps = 16/238 (6%)

Query: 1   MKAIIVEDEFLAQQELSWLIKQHSQIEVAAVFDDGLDVLKYLQDNRVEVIFLDINIPSLD 60
           +  IIVED  LA  +L   I +   +++A  FD+GLD   +LQ N ++++FLDI +    
Sbjct: 2   INCIIVEDAPLAVDKLKNFISKVPLLDLAGTFDNGLDAFDFLQSNTIDLLFLDIQMEQFT 61

Query: 61  GVMLAKNISQFAHKPLIVFITAYKNHAVEAFELEAFDYILKPYHETRIVGMLQKLEAAWQ 120
           G+ L + +     +P I+ ++AY  +AV+ FE +  DY+LKPY   R +  + K+     
Sbjct: 62  GLQLLQALHT---RPHIIIVSAYGEYAVQGFEYDVTDYLLKPYSFERFLKAVNKV----- 113

Query: 121 QQQLPTHASGDNRPAPMTINLVKDKRIIVTNIHDIYYAESHEKLTFVYTRRDEFVMSVNI 180
           Q ++ ++      P    I L  + R++  N+ DI Y E       V T     +  ++ 
Sbjct: 114 QTEMASNPPAQPLPKDY-IFLKTEYRMVRINLCDILYIEGKGAYLHVITDTTRIMTLLSF 172

Query: 181 TEFCSRLPEAYFFRCHRSYCVNLSKIREIEPWFNNTYILKLSDLDFQVPVSRSKVREF 238
            E  S LP   F R H+SY + ++KI  IE       ++K++++  ++P+ +S +++F
Sbjct: 173 KEIESLLPAKQFIRIHKSYLIAINKIDNIE-----RNVVKIANM--RIPIGKSYLKDF 223