Pairwise Alignments

Query, 306 a.a., ABC transporter permease from Dickeya dianthicola 67-19

Subject, 328 a.a., ABC-type dipeptide/oligopeptide/nickel transport system, permease component from Dechlorosoma suillum PS

 Score =  297 bits (760), Expect = 3e-85
 Identities = 161/313 (51%), Positives = 208/313 (66%), Gaps = 8/313 (2%)

Query: 2   SPSGRSVHTRSGAPAARSALARTLSLLWHDRLAR--------LGLFTLALIVGLALLAPW 53
           +P+  SV T +G   A   LAR         LAR        L L  LAL +  A   P+
Sbjct: 15  TPTPTSVSTSAGGGIAVRTLARLAGCRSSTFLARFAANPAGKLALLLLALTLLTAFAGPF 74

Query: 54  ISPQNPYDLTQLMIMDNRLPPGSAGMGGLTYWLGSDDQGRDLLSAMLYGTRTSLTVGVSS 113
           ++PQNPYD   L I+D RLPPGSA   G TY LGSD+QGRDLLSAM+YG R SL V  + 
Sbjct: 75  LAPQNPYDPAALDILDARLPPGSAAAAGGTYLLGSDEQGRDLLSAMVYGLRLSLLVAGAG 134

Query: 114 ALAALAIGMTAGMLSAWQGGKTDALLMRIVDIQLSFPPLLIALILLAVLGQGVDKIILAL 173
              A  +G   G+ + + GG+ + L++ + D+QLSFP LLIAL LLA+ G G+ K+ LAL
Sbjct: 135 TGLACLLGAALGLTAGYFGGRWERLVLALADLQLSFPALLIALALLALSGPGLPKVALAL 194

Query: 174 VITQWAYYARTIRASALLESRRNYVDAARGMAFSTPRILFRHMLPNCLPPLIVVATLRIA 233
             +QWAY+AR+ R +AL+ES ++Y+ AAR    S  R+L+RH+LPNCLPPL+V+  L++A
Sbjct: 195 AASQWAYFARSARVAALVESGKDYIAAARLQGLSHARLLWRHLLPNCLPPLLVILPLQLA 254

Query: 234 YAIMLEATLSFLGIGLPITEPSLGLLIANGFDYLLSGDYWISLFPGVMLLLLIVAINLIG 293
            AI LEATLSFLG+G P TEPSLG LIANGF YLLSG YWISL+PG++L L + AI L  
Sbjct: 255 AAISLEATLSFLGLGAPATEPSLGRLIANGFAYLLSGQYWISLYPGLLLTLAVTAITLAA 314

Query: 294 DALRDALNTRQEE 306
           D L   L+ R++E
Sbjct: 315 DRLAAVLDPRRQE 327